notochord homeobox
ZFIN 
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| lft2 | 0.573 | rps10 | -0.184 |
| chrd | 0.505 | rpl37 | -0.183 |
| ndr2 | 0.494 | zgc:114188 | -0.174 |
| gsc | 0.415 | rps17 | -0.155 |
| nog1 | 0.388 | nme2b.1 | -0.131 |
| otx2a | 0.359 | faua | -0.110 |
| shisa2a | 0.342 | rps20 | -0.110 |
| nnr | 0.329 | eef1b2 | -0.106 |
| her5 | 0.301 | zgc:56493 | -0.104 |
| frzb | 0.294 | rpl19 | -0.103 |
| si:ch73-160h15.3 | 0.294 | mt-nd1 | -0.102 |
| zic2b | 0.287 | rplp0 | -0.099 |
| elovl6 | 0.281 | rps27.1 | -0.096 |
| tbx16 | 0.279 | zgc:158463 | -0.093 |
| tdgf1 | 0.276 | rpl21 | -0.092 |
| fzd8b | 0.273 | rps27a | -0.091 |
| asb11 | 0.273 | prdx2 | -0.091 |
| pkdcca | 0.266 | rpl28 | -0.091 |
| her11 | 0.265 | atp5l | -0.091 |
| pou5f3 | 0.253 | ahcy | -0.090 |
| lft1 | 0.253 | rplp1 | -0.090 |
| sox32 | 0.248 | mt-atp6 | -0.090 |
| LOC108190024 | 0.248 | atp5pd | -0.090 |
| crygmxl1 | 0.242 | rps26l | -0.089 |
| sp5l | 0.237 | rpl9 | -0.089 |
| sox17 | 0.237 | atp5if1b | -0.088 |
| otx1 | 0.237 | zgc:92744 | -0.088 |
| sfrp1a | 0.236 | rpl23 | -0.088 |
| abtb2a | 0.234 | rpl22l1 | -0.087 |
| fscn1a | 0.234 | COX7A2 (1 of many) | -0.086 |
| cxcr4a | 0.231 | rpl26 | -0.086 |
| ednraa | 0.231 | atp5mc3b | -0.085 |
| insb | 0.229 | rps14 | -0.085 |
| lrwd1 | 0.229 | suclg1 | -0.084 |
| zgc:100951 | 0.228 | rpl10 | -0.084 |