| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| mnx2b | 0.460 | id1 | -0.245 |
| slc18a3a | 0.431 | XLOC-003690 | -0.217 |
| LHX3 | 0.415 | mdka | -0.211 |
| mnx1 | 0.400 | cldn5a | -0.196 |
| isl1 | 0.390 | sparc | -0.191 |
| slit3 | 0.367 | sox3 | -0.185 |
| mnx2a | 0.360 | notch3 | -0.179 |
| prph | 0.356 | her15.1 | -0.174 |
| chodl | 0.345 | btg2 | -0.173 |
| isl2a | 0.334 | sdc4 | -0.169 |
| slc5a7a | 0.327 | msi1 | -0.166 |
| chata | 0.315 | msna | -0.161 |
| ache | 0.307 | COX7A2 (1 of many) | -0.161 |
| si:ch211-247j9.1 | 0.305 | cd82a | -0.160 |
| sv2c | 0.300 | vamp3 | -0.160 |
| elavl3 | 0.300 | XLOC-003689 | -0.156 |
| alcama | 0.298 | hmgb2a | -0.155 |
| elavl4 | 0.297 | atp1a1b | -0.154 |
| myt1b | 0.297 | fosab | -0.153 |
| tac1 | 0.297 | sox2 | -0.153 |
| LOC100537369 | 0.296 | sox19a | -0.153 |
| agrn | 0.293 | fabp7a | -0.151 |
| chga | 0.290 | her12 | -0.150 |
| gap43 | 0.290 | tuba8l | -0.143 |
| islr2 | 0.289 | gas1b | -0.142 |
| gng2 | 0.288 | pcna | -0.141 |
| map1b | 0.278 | selenoh | -0.141 |
| cplx2 | 0.277 | her2 | -0.139 |
| gng3 | 0.276 | cd63 | -0.138 |
| golga7ba | 0.275 | si:ch211-286b5.5 | -0.138 |
| onecut1 | 0.272 | gpm6bb | -0.138 |
| id4 | 0.271 | qki2 | -0.136 |
| xpr1a | 0.271 | her4.1 | -0.136 |
| tmsb | 0.270 | pgrmc1 | -0.135 |
| adcyap1b | 0.270 | ccnd1 | -0.134 |