| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| crx | 0.271 | rpl9 | -0.152 |
| syt5b | 0.270 | pax6a | -0.152 |
| otx5 | 0.263 | pax6b | -0.151 |
| irx7 | 0.232 | celf2 | -0.141 |
| samsn1a | 0.229 | zgc:56493 | -0.140 |
| pcp4l1 | 0.229 | ranbp1 | -0.138 |
| gabrr3b | 0.219 | tuba8l4 | -0.135 |
| vamp1 | 0.217 | pcna | -0.135 |
| scg3 | 0.214 | banf1 | -0.133 |
| mpp6b | 0.212 | si:dkey-151g10.6 | -0.130 |
| epb41a | 0.206 | rpl5a | -0.128 |
| chst1 | 0.201 | rps28 | -0.128 |
| sypb | 0.201 | rrm1 | -0.127 |
| stx3a | 0.200 | id1 | -0.127 |
| eml1 | 0.200 | rpl26 | -0.127 |
| vsx1 | 0.196 | anp32b | -0.124 |
| bhlhe23 | 0.191 | mcm7 | -0.123 |
| nsg2 | 0.191 | cldn5a | -0.122 |
| neurod1 | 0.190 | rplp2l | -0.122 |
| ppp1r1b | 0.190 | tuba8l | -0.121 |
| cntn1b | 0.189 | mdka | -0.120 |
| cnrip1b | 0.176 | rpl4 | -0.119 |
| fezf2 | 0.175 | nutf2l | -0.119 |
| irx6a | 0.175 | rps26l | -0.119 |
| ddah2 | 0.174 | rpl38 | -0.118 |
| si:dkey-253i9.4 | 0.170 | tspan7 | -0.117 |
| anp32e | 0.170 | nat8l | -0.117 |
| ckbb | 0.169 | nasp | -0.116 |
| atp1b2a | 0.166 | rpl6 | -0.116 |
| sv2bb | 0.166 | rpl36a | -0.116 |
| cd9a | 0.165 | COX7A2 (1 of many) | -0.116 |
| si:ch73-256g18.2 | 0.165 | rplp1 | -0.115 |
| nexn | 0.164 | setb | -0.115 |
| cst3 | 0.164 | sox2 | -0.115 |
| lin7a | 0.164 | selenoh | -0.114 |