| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| vsx1 | 0.266 | id1 | -0.069 |
| neurod4 | 0.240 | aldob | -0.067 |
| lhx4 | 0.202 | fosab | -0.065 |
| foxg1b | 0.183 | npm1a | -0.064 |
| crx | 0.173 | bzw1b | -0.061 |
| samsn1a | 0.167 | hdlbpa | -0.060 |
| atoh7 | 0.164 | sdc4 | -0.059 |
| foxn4 | 0.163 | eif4ebp3l | -0.058 |
| hes2.1 | 0.161 | atp1b1a | -0.056 |
| calb2b | 0.153 | nop10 | -0.055 |
| syt5b | 0.153 | ccng1 | -0.054 |
| otx5 | 0.152 | nop58 | -0.054 |
| cadm3 | 0.151 | snu13b | -0.054 |
| prdm1b | 0.149 | fbl | -0.053 |
| mpp6b | 0.148 | rsl1d1 | -0.053 |
| bhlhe22 | 0.144 | rps27l | -0.052 |
| ndrg1b | 0.143 | aldh9a1a.1 | -0.051 |
| pcp4l1 | 0.139 | dkc1 | -0.051 |
| insm1a | 0.138 | slc38a5b | -0.051 |
| six6b | 0.138 | eef1da | -0.050 |
| hes2.2 | 0.134 | hspb1 | -0.050 |
| si:ch1073-83n3.2 | 0.134 | nhp2 | -0.050 |
| stx3a | 0.133 | ywhaz | -0.050 |
| nrn1lb | 0.132 | tuba8l2 | -0.049 |
| cnrip1b | 0.130 | cd63 | -0.048 |
| rs1a | 0.129 | junba | -0.048 |
| epb41a | 0.127 | tpm3 | -0.048 |
| golga7ba | 0.126 | vamp3 | -0.048 |
| six3b | 0.124 | zgc:162730 | -0.048 |
| XLOC-014477 | 0.124 | ahnak | -0.047 |
| eml1 | 0.123 | epcam | -0.047 |
| vamp1 | 0.122 | nop56 | -0.047 |
| rorb | 0.122 | apoeb | -0.046 |
| cspg5b | 0.118 | ier2a | -0.046 |
| im:7152348 | 0.117 | krt8 | -0.046 |