| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| lhx4 | 0.415 | id1 | -0.136 |
| mnx2b | 0.372 | sparc | -0.120 |
| mnx2a | 0.349 | XLOC-003690 | -0.097 |
| mnx1 | 0.254 | mdka | -0.095 |
| tuba8l3 | 0.234 | cldn5a | -0.095 |
| slc18a3a | 0.229 | cd82a | -0.093 |
| sox14 | 0.224 | fosab | -0.089 |
| si:ch211-247j9.1 | 0.191 | sox2 | -0.088 |
| alcama | 0.190 | atp1a1b | -0.087 |
| myt1b | 0.188 | msna | -0.087 |
| elavl3 | 0.187 | msi1 | -0.087 |
| LOC100537369 | 0.185 | sdc4 | -0.087 |
| vsx2 | 0.171 | fabp7a | -0.087 |
| chata | 0.165 | tuba8l | -0.084 |
| slc5a7a | 0.162 | mdkb | -0.084 |
| isl1 | 0.161 | sox3 | -0.084 |
| chodl | 0.161 | her2 | -0.084 |
| myt1a | 0.160 | tuba8l4 | -0.081 |
| ebf2 | 0.160 | ccnd1 | -0.079 |
| jagn1a | 0.158 | zfp36l1a | -0.079 |
| sv2c | 0.158 | notch3 | -0.079 |
| chga | 0.157 | qki2 | -0.079 |
| tac1 | 0.157 | selenoh | -0.079 |
| si:dkey-280e21.3 | 0.156 | tpm4a | -0.079 |
| mmp17b | 0.156 | boc | -0.078 |
| slit3 | 0.155 | pcna | -0.078 |
| cxcr4b | 0.153 | gas1b | -0.078 |
| LOC100537384 | 0.151 | pax3a | -0.078 |
| islr2 | 0.151 | COX7A2 (1 of many) | -0.078 |
| thsd7aa | 0.150 | her9 | -0.078 |
| xpr1a | 0.150 | vamp3 | -0.077 |
| ptprfa | 0.149 | pgrmc1 | -0.077 |
| ache | 0.149 | wls | -0.076 |
| ret | 0.149 | atp1b1a | -0.075 |
| golga7ba | 0.149 | slc1a3a | -0.074 |