Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| her1 | 0.187 | fabp3 | -0.049 |
| her7 | 0.148 | sparc | -0.043 |
| hoxa13a | 0.145 | actc1b | -0.040 |
| pcdh8 | 0.143 | ttn.2 | -0.039 |
| csf3r | 0.142 | FQ323156.1 | -0.038 |
| hoxc13b | 0.140 | pabpc4 | -0.036 |
| itm2cb | 0.137 | si:dkey-16p21.8 | -0.036 |
| hoxc13a | 0.135 | bhmt | -0.036 |
| hoxa13b | 0.129 | eno1a | -0.036 |
| hoxd12a | 0.124 | vwde | -0.036 |
| hoxd10a | 0.124 | klhl41b | -0.036 |
| CR550302.1 | 0.122 | gapdh | -0.035 |
| msgn1 | 0.121 | ckma | -0.035 |
| tnfrsf9a | 0.118 | gatm | -0.035 |
| fbln1 | 0.118 | aldoab | -0.035 |
| nid2a | 0.116 | uqcrq | -0.035 |
| hoxb10a | 0.115 | ttn.1 | -0.035 |
| fzd10 | 0.114 | ckmb | -0.035 |
| XLOC-007663 | 0.114 | gamt | -0.035 |
| her12 | 0.112 | col1a2 | -0.034 |
| BX324212.1 | 0.110 | ak1 | -0.034 |
| tbx16l | 0.110 | tmem38a | -0.033 |
| apoc1 | 0.110 | atp2a1 | -0.033 |
| LOC110438086 | 0.108 | akap12b | -0.033 |
| hoxc11a | 0.107 | cox17 | -0.033 |
| BX088583.2 | 0.107 | acta1a | -0.032 |
| CR749774.1 | 0.106 | acta1b | -0.032 |
| inka1b | 0.106 | mybphb | -0.032 |
| mab21l3 | 0.103 | six1b | -0.032 |
| hoxb13a | 0.103 | alcama | -0.032 |
| greb1 | 0.102 | tnnc2 | -0.032 |
| ephb3 | 0.102 | CABZ01078594.1 | -0.032 |
| rargb | 0.100 | zgc:92518 | -0.031 |
| si:dkeyp-110a12.4 | 0.098 | si:ch211-140m22.7 | -0.031 |
| XLOC-004335 | 0.093 | desma | -0.031 |