| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nkx6.3 | 0.136 | celf2 | -0.029 |
| dmrt2a | 0.121 | stmn1b | -0.028 |
| lbx1a | 0.095 | nrn1a | -0.028 |
| hoxc1a | 0.091 | adcyap1b | -0.027 |
| crabp1b | 0.090 | gpm6ab | -0.026 |
| rspo3 | 0.089 | ppp1r14ba | -0.024 |
| slc6a5 | 0.084 | cspg5a | -0.024 |
| hoxb5b | 0.073 | maptb | -0.024 |
| hoxc4a | 0.072 | marcksl1b | -0.023 |
| cygb1 | 0.070 | gap43 | -0.023 |
| hoxb6b | 0.069 | ebf3a | -0.023 |
| calb2b | 0.065 | en2b | -0.023 |
| hoxb6a | 0.065 | slc6a1b | -0.023 |
| hoxd4a | 0.064 | islr2 | -0.023 |
| dmrta2 | 0.063 | pbx1a | -0.022 |
| dhrs3b | 0.058 | sox4a | -0.022 |
| hoxb3a | 0.057 | ckbb | -0.022 |
| pax8 | 0.054 | xpr1a | -0.021 |
| slc30a2 | 0.053 | rtn1b | -0.021 |
| mecom | 0.052 | slc6a1a | -0.021 |
| hoxb5a | 0.052 | ywhaz | -0.021 |
| pax2a | 0.051 | stmn2a | -0.021 |
| meis3 | 0.051 | olfm1b | -0.020 |
| hoxb8a | 0.050 | slc17a6a | -0.020 |
| lhx5 | 0.049 | ywhag2 | -0.020 |
| hoxa3a | 0.049 | nrp1a | -0.020 |
| plekhh1 | 0.048 | runx1t1 | -0.019 |
| crabp2a | 0.048 | si:dkey-81l17.6 | -0.019 |
| mdka | 0.048 | snap25b | -0.019 |
| wnt11r | 0.047 | si:ch73-127m5.1 | -0.019 |
| fabp11a | 0.046 | mab21l1 | -0.019 |
| hoxc3a | 0.045 | klf7b | -0.019 |
| sp8a | 0.044 | mllt11 | -0.019 |
| nkx1.2lb | 0.044 | rab6bb | -0.019 |
| tnfrsf19 | 0.044 | lhx9 | -0.019 |