| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| dmrt2a | 0.378 | id1 | -0.102 |
| lbx1a | 0.357 | fabp7a | -0.093 |
| slc6a5 | 0.302 | XLOC-003690 | -0.092 |
| slc32a1 | 0.296 | msna | -0.091 |
| pax2a | 0.286 | cd81a | -0.091 |
| nkx1.2lb | 0.285 | tubb4b | -0.082 |
| pax8 | 0.271 | cd63 | -0.081 |
| lhx1a | 0.260 | marcksl1a | -0.080 |
| cacna2d3 | 0.256 | qki2 | -0.078 |
| lhx5 | 0.224 | vamp3 | -0.078 |
| klhl14 | 0.222 | her15.1 | -0.077 |
| nrxn3a | 0.214 | atp1a1b | -0.076 |
| pax2b | 0.211 | cd82a | -0.075 |
| slc30a2 | 0.208 | fosab | -0.074 |
| nrxn1a | 0.205 | cldn5a | -0.074 |
| LOC100330246 | 0.194 | notch3 | -0.074 |
| nsg2 | 0.193 | msi1 | -0.073 |
| znf385c | 0.184 | jun | -0.072 |
| sncgb | 0.184 | CU467822.1 | -0.072 |
| stxbp1a | 0.183 | atp1b1a | -0.071 |
| rbfox3a | 0.180 | tuba8l4 | -0.071 |
| XLOC-028064 | 0.180 | her6 | -0.070 |
| calb2b | 0.179 | sox2 | -0.070 |
| pth1rb | 0.177 | zgc:165461 | -0.067 |
| stx1b | 0.176 | sdc4 | -0.066 |
| spag1a | 0.170 | COX7A2 (1 of many) | -0.066 |
| nrxn3b | 0.170 | si:ch211-286b5.5 | -0.065 |
| scrt1a | 0.168 | gpm6bb | -0.065 |
| BX247868.1 | 0.167 | atp1b4 | -0.065 |
| phlda1 | 0.163 | klf6a | -0.065 |
| grin1a | 0.163 | CR848047.1 | -0.065 |
| cplx2l | 0.162 | gng5 | -0.064 |
| hoxb9a | 0.158 | wls | -0.064 |
| rbfox1 | 0.158 | si:ch73-281n10.2 | -0.064 |
| cplx2 | 0.155 | sox3 | -0.064 |