Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbxta | 0.583 | sox3 | -0.428 |
| osr1 | 0.563 | cxcr4b | -0.298 |
| wnt11f2 | 0.560 | cited4b | -0.282 |
| mespab | 0.532 | id1 | -0.270 |
| ndr2 | 0.474 | sox19a | -0.268 |
| lhx1a | 0.466 | cxcr4a | -0.236 |
| dkk1b | 0.445 | asb11 | -0.227 |
| FP102169.1 | 0.445 | inka1a | -0.220 |
| lft1 | 0.430 | zic2b | -0.207 |
| sebox | 0.429 | shisa2a | -0.194 |
| wnt5b | 0.422 | si:ch1073-80i24.3 | -0.190 |
| fgf8a | 0.417 | foxd5 | -0.185 |
| msgn1 | 0.407 | si:ch211-173m16.2 | -0.157 |
| tpbga | 0.400 | foxh1 | -0.154 |
| hes6 | 0.398 | sb:cb81 | -0.149 |
| aldh1a2 | 0.396 | gpd1b | -0.137 |
| zic2a | 0.390 | si:ch211-170d8.2 | -0.136 |
| cyp27c1 | 0.386 | glulb | -0.129 |
| wu:fb97g03 | 0.382 | sfrp1a | -0.126 |
| aplnrb | 0.377 | blf | -0.124 |
| cdx4 | 0.377 | zgc:64022 | -0.124 |
| sp5a | 0.373 | stk35l | -0.122 |
| eve1 | 0.368 | aldob | -0.121 |
| gata5 | 0.366 | mex3b | -0.117 |
| mespaa | 0.358 | snai2 | -0.116 |
| fscn1a | 0.350 | gadd45ga | -0.114 |
| p4ha2 | 0.349 | dnajb1b | -0.113 |
| foxa | 0.346 | kazald2 | -0.109 |
| ndr1 | 0.338 | zgc:100951 | -0.108 |
| notum1a | 0.331 | pkdccb | -0.107 |
| im:7138239 | 0.330 | LOC101885477 | -0.107 |
| efnb2b | 0.330 | si:dkey-11o15.10 | -0.106 |
| trib3 | 0.328 | pfkfb4b | -0.105 |
| pitx2 | 0.325 | nanog | -0.103 |
| gata6 | 0.316 | lfng | -0.103 |