Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdx4 | 0.509 | rpl37 | -0.467 |
| apoc1 | 0.486 | rps10 | -0.460 |
| cdx1a | 0.471 | zgc:114188 | -0.436 |
| si:dkey-261j4.5 | 0.470 | rps17 | -0.400 |
| tbx16 | 0.460 | atp5mc3b | -0.359 |
| blf | 0.455 | atp1b1a | -0.355 |
| ved | 0.452 | atp5f1b | -0.348 |
| cx43.4 | 0.430 | zgc:56493 | -0.346 |
| cxcl12a | 0.427 | atp5fa1 | -0.338 |
| nradd | 0.424 | cox6a1 | -0.334 |
| dkc1 | 0.423 | slc25a5 | -0.322 |
| akap12b | 0.417 | cox5aa | -0.319 |
| wu:fb97g03 | 0.417 | atp5mc1 | -0.317 |
| hspb1 | 0.416 | COX5B | -0.313 |
| apoeb | 0.416 | mt-nd1 | -0.310 |
| ncl | 0.415 | atp5l | -0.309 |
| nop58 | 0.413 | cox8a | -0.303 |
| zic2b | 0.403 | suclg1 | -0.300 |
| npm1a | 0.401 | atp5pf | -0.298 |
| NC-002333.4 | 0.399 | cox4i1 | -0.297 |
| tmem136a | 0.393 | hnrnpa0l | -0.296 |
| XLOC-015209 | 0.392 | atp5f1d | -0.295 |
| anp32e | 0.392 | atp5meb | -0.293 |
| nop56 | 0.389 | vdac2 | -0.293 |
| fbl | 0.386 | cdh17 | -0.292 |
| bms1 | 0.384 | atp5pd | -0.291 |
| gnl3 | 0.376 | mdh2 | -0.289 |
| vox | 0.375 | idh2 | -0.288 |
| pum3 | 0.374 | vdac3 | -0.285 |
| asph | 0.372 | ndufa4l | -0.284 |
| anp32a | 0.371 | h3f3a | -0.281 |
| rrs1 | 0.369 | cox7a2a | -0.278 |
| ddx18 | 0.366 | atp5pb | -0.278 |
| osr1 | 0.365 | slc25a3b | -0.278 |
| znfl2a | 0.365 | ndrg1a | -0.273 |