Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdx4 | 0.519 | rpl37 | -0.169 |
| tbx16 | 0.479 | rps10 | -0.166 |
| im:7138239 | 0.473 | zgc:114188 | -0.140 |
| sp5l | 0.460 | rps17 | -0.125 |
| eve1 | 0.442 | prdx2 | -0.105 |
| cdx1a | 0.442 | vdac2 | -0.093 |
| XLOC-016582 | 0.364 | hnrnpa0l | -0.093 |
| mespab | 0.360 | zgc:56493 | -0.091 |
| XLOC-015209 | 0.356 | h3f3a | -0.090 |
| tbxta | 0.356 | zgc:158463 | -0.089 |
| ved | 0.355 | ap2m1a | -0.086 |
| pou5f3 | 0.347 | mcl1a | -0.085 |
| cx43.4 | 0.345 | hbae1.1 | -0.083 |
| vox | 0.341 | hbbe1.3 | -0.082 |
| LOC100008030 | 0.341 | hbae3 | -0.081 |
| add3b | 0.339 | cct2 | -0.076 |
| ca9 | 0.333 | hbbe1.1 | -0.073 |
| hspb1 | 0.333 | hbae1.3 | -0.073 |
| vrtn | 0.309 | hbbe2 | -0.072 |
| msgn1 | 0.306 | ptmaa | -0.068 |
| stm | 0.306 | CR383676.1 | -0.068 |
| s100a1 | 0.297 | si:ch1073-429i10.3.1 | -0.067 |
| COX7A2 | 0.288 | atp5if1b | -0.065 |
| polr3gla | 0.277 | romo1 | -0.065 |
| zmp:0000000624 | 0.268 | hbbe1.2 | -0.064 |
| ISCU | 0.266 | ccni | -0.063 |
| sp5a | 0.265 | cahz | -0.063 |
| dnmt3bb.2 | 0.263 | rplp0 | -0.061 |
| si:dkey-261j4.5 | 0.262 | gpx1a | -0.060 |
| anp32e | 0.258 | blvrb | -0.060 |
| ppig | 0.254 | pvalb1 | -0.060 |
| mespaa | 0.254 | sod1 | -0.060 |
| si:dkey-66i24.9 | 0.253 | hemgn | -0.059 |
| zic2b | 0.250 | pvalb2 | -0.058 |
| BX927258.1 | 0.250 | actc1b | -0.058 |