Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| onecut3a | 0.073 | hmgb2b | -0.047 |
| LOC100330653 | 0.072 | hmgb2a | -0.046 |
| onecut1 | 0.072 | pcna | -0.040 |
| lin28a | 0.069 | id1 | -0.039 |
| XLOC-016165 | 0.066 | stmn1a | -0.038 |
| pde11a | 0.063 | si:ch73-281n10.2 | -0.038 |
| tspeara | 0.063 | ranbp1 | -0.036 |
| si:ch211-215d8.2 | 0.061 | anp32b | -0.036 |
| nrn1a | 0.056 | mcm7 | -0.036 |
| snap25a | 0.056 | nop56 | -0.035 |
| tubb2 | 0.055 | nasp | -0.035 |
| stxbp1a | 0.055 | msna | -0.035 |
| stmn3 | 0.053 | h2afvb | -0.035 |
| pcsk1nl | 0.053 | ran | -0.034 |
| cplx2l | 0.053 | sox19a | -0.034 |
| calm1a | 0.052 | nop58 | -0.034 |
| onecut3b | 0.050 | hmgn2 | -0.033 |
| or126-2 | 0.050 | snrpb | -0.033 |
| ptger1a | 0.049 | banf1 | -0.033 |
| ncanb | 0.049 | ccnd1 | -0.033 |
| sncb | 0.048 | fen1 | -0.033 |
| stx1b | 0.048 | tuba8l4 | -0.033 |
| nrxn1a | 0.048 | snu13b | -0.032 |
| vat1 | 0.047 | rrm1 | -0.032 |
| cplx2 | 0.047 | dkc1 | -0.032 |
| inab | 0.047 | chaf1a | -0.032 |
| gckr | 0.047 | XLOC-003690 | -0.032 |
| atp6v0cb | 0.047 | rpa3 | -0.032 |
| ywhag2 | 0.046 | nutf2l | -0.032 |
| slc17a6a | 0.046 | si:dkey-151g10.6 | -0.031 |
| slc1a2b | 0.045 | npm1a | -0.031 |
| zgc:112038 | 0.045 | tuba8l | -0.031 |
| onecutl | 0.045 | rps20 | -0.031 |
| rtn1a | 0.044 | rpa2 | -0.031 |
| gjd1a | 0.044 | nop10 | -0.031 |