Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:ch1073-70f20.1 | 0.184 | id1 | -0.070 |
| urp1 | 0.178 | XLOC-003690 | -0.068 |
| sstr2a | 0.171 | mdka | -0.065 |
| pkd2l1 | 0.150 | cldn5a | -0.064 |
| snap25a | 0.150 | si:dkey-151g10.6 | -0.061 |
| cplx2l | 0.147 | her15.1 | -0.060 |
| stx1b | 0.147 | sox3 | -0.059 |
| stxbp1a | 0.147 | notch3 | -0.058 |
| myo3b | 0.143 | hmgb2b | -0.057 |
| pkd1l2a | 0.141 | rplp1 | -0.056 |
| syt14a | 0.140 | XLOC-003689 | -0.055 |
| gad1b | 0.137 | hmgb2a | -0.054 |
| scg2a | 0.137 | rps15a | -0.054 |
| tubb2 | 0.135 | vamp3 | -0.053 |
| cpe | 0.134 | msi1 | -0.052 |
| ywhag2 | 0.134 | sparc | -0.052 |
| gpx3 | 0.133 | cd82a | -0.051 |
| slc32a1 | 0.133 | fabp7a | -0.051 |
| pde11a | 0.133 | tspan7 | -0.050 |
| pcsk1nl | 0.132 | rpl23 | -0.050 |
| atp1a3b | 0.132 | rpl12 | -0.050 |
| si:ch211-214j24.9 | 0.130 | rps20 | -0.049 |
| nefma | 0.129 | her4.2 | -0.049 |
| lin28a | 0.129 | sox19a | -0.048 |
| tal2 | 0.128 | gfap | -0.048 |
| si:dkey-10f21.4 | 0.127 | pgrmc1 | -0.048 |
| ca2 | 0.124 | si:dkey-42i9.4 | -0.048 |
| XLOC-004991 | 0.124 | sdc4 | -0.048 |
| rbfox3a | 0.122 | rpl26 | -0.048 |
| cplx2 | 0.122 | gpm6bb | -0.048 |
| eno2 | 0.122 | ran | -0.047 |
| sncb | 0.121 | tuba8l | -0.047 |
| sypa | 0.120 | her4.1 | -0.047 |
| kcnj19a | 0.120 | rps14 | -0.047 |
| cdk5r1b | 0.119 | sb:cb81 | -0.047 |