| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ca6 | 0.159 | fgfbp2b | -0.067 |
| c1qtnf12 | 0.146 | foxc1b | -0.064 |
| hoxb9a | 0.131 | ecrg4a | -0.057 |
| pitx1 | 0.129 | col9a2 | -0.056 |
| pitx2 | 0.124 | col11a2 | -0.054 |
| hoxc11a | 0.124 | sox9a | -0.053 |
| evx1 | 0.119 | cnmd | -0.052 |
| cfd | 0.119 | dlx5a | -0.050 |
| tpbga | 0.115 | col2a1a | -0.049 |
| hoxc9a | 0.115 | col9a3 | -0.049 |
| fmoda | 0.112 | col9a1a | -0.048 |
| msx3 | 0.110 | hoxa2b | -0.046 |
| capn12 | 0.100 | dlx2a | -0.044 |
| col12a1b | 0.098 | otos | -0.043 |
| postnb | 0.098 | hapln1a | -0.041 |
| hoxa11a | 0.097 | six2a | -0.041 |
| dhrs3b | 0.097 | gsc | -0.040 |
| adma | 0.096 | wwp2 | -0.040 |
| sult2st1 | 0.096 | dlx3b | -0.040 |
| si:ch211-67e16.11 | 0.095 | ucmab | -0.039 |
| lypd6 | 0.093 | si:ch211-156j16.1 | -0.039 |
| hoxb10a | 0.092 | fxyd1 | -0.039 |
| mmp11a | 0.091 | epyc | -0.038 |
| wnt11r | 0.090 | matn1 | -0.037 |
| col5a2a | 0.089 | lhx6 | -0.037 |
| bmp2b | 0.087 | si:dkey-6n6.1 | -0.036 |
| aplnr2 | 0.085 | tbx1 | -0.036 |
| nog1 | 0.085 | dlx4b | -0.036 |
| tnn | 0.084 | dlx4a | -0.035 |
| hoxc10a | 0.084 | si:dkey-19b23.8 | -0.035 |
| isl2b | 0.083 | acana | -0.035 |
| nkd1 | 0.083 | sema3bl | -0.035 |
| fbn2a.1 | 0.083 | hpgd | -0.034 |
| dio3b | 0.082 | CR848683.2 | -0.034 |
| hoxa9a | 0.081 | AL929222.2 | -0.034 |