Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| mespab | 0.173 | sox3 | -0.122 |
| osr1 | 0.172 | id1 | -0.109 |
| lhx1a | 0.158 | sox19a | -0.101 |
| LOC100536112 | 0.153 | cxcr4b | -0.096 |
| si:ch73-196i15.3 | 0.151 | cited4b | -0.073 |
| rab38b | 0.151 | zic2b | -0.073 |
| tbxta | 0.147 | asb11 | -0.063 |
| insb | 0.146 | aldob | -0.062 |
| fgf8a | 0.146 | inka1a | -0.057 |
| dpys | 0.146 | si:ch1073-80i24.3 | -0.050 |
| zic2a | 0.146 | hmgb2a | -0.050 |
| efnb2b | 0.145 | shisa2a | -0.049 |
| gata5 | 0.141 | cxcr4a | -0.049 |
| wnt11f2 | 0.141 | si:ch211-170d8.2 | -0.048 |
| sebox | 0.140 | foxd5 | -0.047 |
| ccdc39 | 0.138 | sb:cb81 | -0.046 |
| msgn1 | 0.138 | her8a | -0.043 |
| aldh1a2 | 0.138 | sox2 | -0.040 |
| elovl6 | 0.138 | foxh1 | -0.040 |
| foxa | 0.136 | zgc:100951 | -0.039 |
| FP102169.1 | 0.134 | cdkn1ca | -0.037 |
| cyp27c1 | 0.133 | stk35l | -0.037 |
| pitx2 | 0.131 | pias4a | -0.037 |
| ndr1 | 0.131 | cited2 | -0.036 |
| dkk1b | 0.129 | eif4bb | -0.036 |
| cga | 0.129 | pkdccb | -0.035 |
| LOC100534673 | 0.127 | si:dkey-56m19.5 | -0.035 |
| XLOC-002640 | 0.127 | tubb4b | -0.035 |
| kirrel3l | 0.127 | snai2 | -0.035 |
| flrt3 | 0.126 | gpd1b | -0.035 |
| p4ha2 | 0.126 | kazald2 | -0.035 |
| pfkfb3 | 0.122 | eloal | -0.035 |
| odf3l2b | 0.121 | CABZ01069022.2 | -0.035 |
| gata6 | 0.120 | admp | -0.035 |
| aplnra | 0.120 | ncapd2 | -0.034 |