Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| LOC101886347 | 0.318 | sox3 | -0.061 |
| fam19a4a | 0.269 | cited4b | -0.052 |
| LOC108183534 | 0.230 | sox19a | -0.046 |
| elf3 | 0.221 | id1 | -0.042 |
| si:dkey-201i24.3 | 0.212 | cxcr4b | -0.038 |
| LOC101882181 | 0.198 | cfl1 | -0.037 |
| XLOC-023594 | 0.190 | cxcr4a | -0.036 |
| LOC110440017 | 0.182 | si:ch211-276i12.11 | -0.035 |
| trpc6a | 0.182 | sb:cb81 | -0.033 |
| gata2b | 0.163 | uhrf1 | -0.033 |
| FO834814.1 | 0.153 | si:dkey-56m19.5 | -0.033 |
| LOC100332187 | 0.152 | ehmt1b | -0.033 |
| hgfa | 0.149 | atp5mc1 | -0.033 |
| spaw | 0.144 | usp10 | -0.032 |
| sox6 | 0.131 | hmgb2a | -0.031 |
| ighv1-4 | 0.127 | aldob | -0.031 |
| CR293502.1 | 0.124 | sae1 | -0.031 |
| BX547934.2 | 0.121 | oaz1a | -0.030 |
| AL590150.1 | 0.120 | bsg | -0.029 |
| LOC110439690 | 0.120 | sumo2b | -0.029 |
| si:ch211-172l8.4 | 0.118 | polr2i | -0.029 |
| fas | 0.116 | si:ch211-173m16.2 | -0.029 |
| CR792438.1 | 0.111 | nolc1 | -0.029 |
| pvalb9 | 0.109 | eno3 | -0.029 |
| ndr2 | 0.105 | u2af2a | -0.029 |
| BX649324.1 | 0.105 | glulb | -0.028 |
| BX601644.2 | 0.101 | LOC101885477 | -0.028 |
| ryr1a | 0.101 | srprb | -0.028 |
| capn9 | 0.098 | snw1 | -0.027 |
| prlra | 0.095 | mcm5 | -0.027 |
| wnt11f2 | 0.094 | gkap1 | -0.027 |
| mst1ra | 0.094 | gpd1b | -0.026 |
| lrp1ba | 0.093 | snrnp40 | -0.026 |
| m1ap | 0.091 | ddx3xb | -0.026 |
| btbd16 | 0.087 | lamtor4 | -0.026 |