Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| pecam1 | 0.286 | fabp3 | -0.049 |
| myct1a | 0.281 | si:ch211-137a8.4 | -0.034 |
| si:dkeyp-97a10.2 | 0.266 | cx43.4 | -0.030 |
| si:ch211-145b13.6 | 0.265 | marcksb | -0.030 |
| kdr | 0.264 | tuba1c | -0.027 |
| clec14a | 0.263 | hmgb1b | -0.026 |
| notchl | 0.261 | mdkb | -0.026 |
| plvapb | 0.261 | tuba1a | -0.026 |
| cdh5 | 0.255 | XLOC-003690 | -0.026 |
| myct1b | 0.250 | XLOC-003689 | -0.025 |
| kdrl | 0.248 | si:ch211-288g17.3 | -0.024 |
| ecscr | 0.246 | sox11b | -0.024 |
| flt1 | 0.244 | hmgb3a | -0.023 |
| she | 0.241 | sox11a | -0.023 |
| tie1 | 0.239 | XLOC-003692 | -0.023 |
| si:ch73-334d15.2 | 0.238 | her15.1 | -0.023 |
| rasip1 | 0.228 | elavl3 | -0.022 |
| LOC101884756 | 0.217 | fabp7a | -0.022 |
| scarf1 | 0.217 | h2afva | -0.022 |
| si:ch211-33e4.2 | 0.216 | hes6 | -0.022 |
| LOC101882770 | 0.214 | mdka | -0.022 |
| LOC101882826 | 0.208 | aldob | -0.021 |
| yrk | 0.205 | epb41a | -0.021 |
| adgrl4 | 0.204 | her4.2 | -0.021 |
| etv2 | 0.204 | ckbb | -0.020 |
| slc9a3r1b | 0.201 | ddx39ab | -0.020 |
| ccm2l | 0.197 | dla | -0.020 |
| fgd5a | 0.195 | gpm6aa | -0.020 |
| cldn5b | 0.194 | tmeff1b | -0.020 |
| srgn | 0.192 | abhd6a | -0.020 |
| XLOC-014079 | 0.192 | apex1 | -0.019 |
| egfl7 | 0.191 | cspg5a | -0.019 |
| erg | 0.191 | CU467822.1 | -0.019 |
| pcdh12 | 0.189 | epcam | -0.019 |
| tek | 0.188 | her4.1 | -0.019 |