Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| ifitm5 | 0.300 | si:ch73-1a9.3 | -0.041 |
| si:dkey-32e6.6 | 0.299 | tmsb4x | -0.038 |
| panx3 | 0.288 | si:ch211-222l21.1 | -0.035 |
| col5a2b | 0.281 | hmga1a | -0.033 |
| cd81b | 0.278 | stmn1a | -0.029 |
| tmem119a | 0.278 | hmgn2 | -0.028 |
| pltp | 0.266 | si:dkey-261h17.1 | -0.026 |
| sgms2a | 0.266 | hmgb2a | -0.026 |
| col10a1a | 0.263 | twist1a | -0.026 |
| bgna | 0.255 | cirbpb | -0.026 |
| enam | 0.247 | fabp3 | -0.025 |
| entpd5a | 0.245 | tgfbi | -0.025 |
| phospho1 | 0.240 | seta | -0.025 |
| slc8a4b | 0.229 | hmgb3a | -0.025 |
| phex | 0.224 | hmgb2b | -0.025 |
| si:ch211-106n13.3 | 0.217 | tmem176 | -0.024 |
| zbtb7c | 0.192 | si:ch73-281n10.2 | -0.024 |
| smpd3 | 0.190 | rnaseh2a | -0.024 |
| spp1 | 0.184 | snrpf | -0.022 |
| si:cabz01100188.1 | 0.166 | dut | -0.022 |
| si:dkey-13e3.1 | 0.165 | mcm5 | -0.022 |
| zgc:92162 | 0.165 | h2afvb | -0.021 |
| bmp8a | 0.158 | ebf3a | -0.021 |
| dlx2b | 0.157 | chaf1a | -0.021 |
| si:dkey-202c14.3 | 0.156 | parp1 | -0.021 |
| mfsd2b | 0.151 | lin28a | -0.021 |
| ano5a | 0.151 | actb2 | -0.021 |
| sp7 | 0.147 | hoxb3a | -0.021 |
| si:ch211-76l23.4 | 0.147 | pcna | -0.021 |
| sod3b | 0.145 | cthrc1a | -0.021 |
| myadml2 | 0.141 | mcm7 | -0.021 |
| plcd3b | 0.138 | tubb2b | -0.020 |
| chst3b | 0.136 | pfdn4 | -0.020 |
| loxl4 | 0.131 | snrpb | -0.020 |
| prp | 0.130 | ssrp1a | -0.020 |