Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| si:ch211-219a15.3 | 0.433 | ptmab | -0.085 |
| sparcl1 | 0.429 | ptmaa | -0.084 |
| slc7a11 | 0.422 | hmgn6 | -0.075 |
| col28a1a | 0.365 | tmsb4x | -0.070 |
| mgarp | 0.360 | marcksl1b | -0.066 |
| foxe3 | 0.353 | hmgb1a | -0.064 |
| spon1b | 0.342 | h2afva | -0.063 |
| slc3a2a | 0.312 | ckbb | -0.062 |
| pitx3 | 0.311 | si:ch211-137a8.4 | -0.060 |
| col4a4 | 0.305 | fabp3 | -0.059 |
| col4a3 | 0.302 | tuba1c | -0.059 |
| col28a1b | 0.301 | fabp7a | -0.058 |
| CR356246.1 | 0.293 | tuba1a | -0.054 |
| wif1 | 0.290 | gpm6ab | -0.052 |
| tinagl1 | 0.279 | gpm6aa | -0.050 |
| si:dkey-164f24.2 | 0.254 | nova2 | -0.047 |
| igfbp2a | 0.251 | ubc | -0.047 |
| scinla | 0.247 | si:ch211-222l21.1 | -0.047 |
| zgc:55262 | 0.246 | mdkb | -0.045 |
| tgfb3 | 0.245 | marcksb | -0.044 |
| si:ch211-59p23.1 | 0.244 | h3f3d | -0.044 |
| prox2 | 0.241 | mdka | -0.044 |
| wnt2bb | 0.241 | cadm3 | -0.043 |
| gja8b | 0.235 | marcksl1a | -0.043 |
| hspg2 | 0.230 | rorb | -0.042 |
| ace | 0.224 | foxg1b | -0.041 |
| endouc | 0.219 | si:dkey-56m19.5 | -0.040 |
| LOC110438076 | 0.216 | jpt1b | -0.040 |
| mylk5 | 0.211 | si:ch73-1a9.3 | -0.039 |
| igfbp7 | 0.210 | cx43.4 | -0.039 |
| fgfrl1b | 0.207 | histh1l | -0.039 |
| ASS1 | 0.205 | si:dkey-276j7.1 | -0.039 |
| trabd2a | 0.198 | hnrnpa0a | -0.038 |
| ackr4b | 0.198 | epb41a | -0.038 |
| gclc | 0.196 | cspg5a | -0.037 |