Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdh5 | 0.453 | fabp3 | -0.055 |
| clec14a | 0.451 | si:ch211-137a8.4 | -0.041 |
| pecam1 | 0.441 | tuba1c | -0.040 |
| tie1 | 0.437 | mdkb | -0.037 |
| myct1a | 0.427 | cx43.4 | -0.036 |
| plvapb | 0.418 | hmgb1b | -0.035 |
| rasip1 | 0.415 | marcksb | -0.035 |
| si:dkeyp-97a10.2 | 0.411 | tuba1a | -0.035 |
| etv2 | 0.406 | ckbb | -0.031 |
| si:ch211-145b13.6 | 0.406 | elavl3 | -0.031 |
| she | 0.403 | gpm6aa | -0.030 |
| kdr | 0.402 | hmgn3 | -0.030 |
| scarf1 | 0.401 | stmn1b | -0.029 |
| kdrl | 0.397 | aldob | -0.028 |
| flt1 | 0.387 | epb41a | -0.028 |
| notchl | 0.374 | nat8l | -0.028 |
| ecscr | 0.374 | ppa1b | -0.028 |
| si:ch73-334d15.2 | 0.366 | sox11a | -0.028 |
| myct1b | 0.362 | tmeff1b | -0.028 |
| yrk | 0.348 | XLOC-003690 | -0.028 |
| erg | 0.345 | cdh2 | -0.027 |
| adgrl4 | 0.344 | mdh1aa | -0.027 |
| egfl7 | 0.336 | sox11b | -0.027 |
| fli1b | 0.335 | tox | -0.027 |
| gpr182 | 0.332 | fabp7a | -0.026 |
| LOC101882770 | 0.328 | hes6 | -0.026 |
| cldn5b | 0.322 | hmgb3a | -0.026 |
| fgd5a | 0.322 | msi1 | -0.026 |
| thsd1 | 0.321 | si:dkey-276j7.1 | -0.026 |
| ccm2l | 0.319 | sox3 | -0.026 |
| mcamb | 0.315 | tmsb | -0.026 |
| pcdh12 | 0.314 | cadm3 | -0.025 |
| tek | 0.311 | cspg5a | -0.025 |
| sox18 | 0.309 | ncam1a | -0.025 |
| ushbp1 | 0.306 | si:ch211-133n4.4 | -0.025 |