Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cfl1l | 0.060 | hmgb1b | -0.029 |
| epcam | 0.057 | marcksl1a | -0.028 |
| krt5 | 0.054 | marcksb | -0.026 |
| pycard | 0.054 | nova2 | -0.026 |
| tmsb1 | 0.054 | tuba1c | -0.026 |
| lgals3b | 0.053 | si:dkey-56m19.5 | -0.025 |
| s100a10b | 0.053 | hmgb3a | -0.024 |
| spint1a | 0.052 | hnrnpa0a | -0.024 |
| tmem238a | 0.052 | tuba1a | -0.024 |
| capns1a | 0.051 | gpm6aa | -0.023 |
| cd9b | 0.051 | ckbb | -0.022 |
| krt4 | 0.051 | elavl3 | -0.022 |
| s100v1 | 0.051 | rtn1a | -0.022 |
| pfn1 | 0.050 | si:ch211-137a8.4 | -0.022 |
| anxa1a | 0.049 | si:ch211-288g17.3 | -0.022 |
| krtt1c19e | 0.049 | mdkb | -0.021 |
| mapk12a | 0.049 | si:dkey-276j7.1 | -0.021 |
| zgc:101810 | 0.049 | fabp3 | -0.020 |
| myh9a | 0.048 | gpm6ab | -0.020 |
| zgc:175088 | 0.048 | jpt1b | -0.020 |
| cyt1 | 0.047 | stmn1b | -0.020 |
| pof1b | 0.047 | tmeff1b | -0.020 |
| aep1 | 0.046 | chd4a | -0.019 |
| cldn1 | 0.046 | h2afva | -0.019 |
| cyt1l | 0.046 | si:ch211-133n4.4 | -0.019 |
| spaca4l | 0.046 | sox11b | -0.019 |
| CABZ01092156.1 | 0.045 | tubb5 | -0.019 |
| capgb | 0.045 | zc4h2 | -0.019 |
| cldni | 0.045 | fscn1a | -0.018 |
| gpa33a | 0.045 | hes6 | -0.018 |
| gsnb | 0.045 | mex3b | -0.018 |
| padi2 | 0.045 | msna | -0.018 |
| prr13 | 0.045 | smarce1 | -0.018 |
| tuba8l2 | 0.045 | sox11a | -0.018 |
| arhgef5 | 0.044 | tmsb | -0.018 |