Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tbx16 | 0.065 | hbae3 | -0.017 |
| mespab | 0.062 | hbbe1.3 | -0.017 |
| im:7138239 | 0.060 | hbae1.1 | -0.016 |
| vrtn | 0.056 | pvalb1 | -0.016 |
| wu:fb97g03 | 0.054 | pvalb2 | -0.016 |
| msgn1 | 0.051 | atp6v0cb | -0.015 |
| mespaa | 0.050 | gpm6ab | -0.015 |
| snai1a | 0.049 | tuba1c | -0.015 |
| XLOC-015209 | 0.049 | marcksl1a | -0.015 |
| XLOC-041707 | 0.049 | actc1b | -0.014 |
| FP102169.1 | 0.047 | ckbb | -0.014 |
| si:dkeyp-2e4.3 | 0.047 | gpm6aa | -0.014 |
| ndr2 | 0.046 | hbbe1.1 | -0.014 |
| tbxta | 0.046 | rnasekb | -0.014 |
| wnt11f2 | 0.046 | rtn1a | -0.014 |
| ddx4 | 0.045 | gapdhs | -0.013 |
| BX927327.1 | 0.044 | gng3 | -0.013 |
| lft1 | 0.044 | calm1a | -0.013 |
| si:dkey-261j4.5 | 0.043 | atpv0e2 | -0.012 |
| efnb2b | 0.042 | elavl4 | -0.012 |
| LOC100008030 | 0.042 | hbae1.3 | -0.012 |
| sp5l | 0.042 | hbbe1.2 | -0.012 |
| foxa | 0.040 | hbbe2 | -0.012 |
| LOC103908936 | 0.040 | mylpfa | -0.012 |
| cmtm6 | 0.039 | nova2 | -0.012 |
| cth1 | 0.039 | sncb | -0.012 |
| cyp27c1 | 0.038 | stmn1b | -0.012 |
| helb | 0.037 | vamp2 | -0.012 |
| tbx16l | 0.037 | cahz | -0.011 |
| ved | 0.037 | cspg5a | -0.011 |
| XLOC-016582 | 0.037 | ndrg4 | -0.011 |
| eve1 | 0.036 | nsg2 | -0.011 |
| lrwd1 | 0.036 | rtn1b | -0.011 |
| stm | 0.036 | snap25a | -0.011 |
| aplnrb | 0.035 | snap25b | -0.011 |