Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| CABZ01109081.1 | 0.210 | hapln1a | -0.036 |
| fbn2a.1 | 0.134 | cnmd | -0.036 |
| gata5 | 0.129 | nme2b.1 | -0.035 |
| CABZ01027646.1 | 0.127 | foxc1b | -0.035 |
| XLOC-028299 | 0.126 | fgfbp2b | -0.034 |
| pitx1 | 0.109 | ecrg4a | -0.032 |
| alcamb | 0.109 | barx1 | -0.031 |
| AL928927.1 | 0.108 | sox9a | -0.030 |
| msx3 | 0.106 | dlx5a | -0.030 |
| aanat1 | 0.105 | fibina | -0.029 |
| tmem88b | 0.104 | col2a1a | -0.029 |
| rhag | 0.102 | ebf3a | -0.028 |
| BX005396.3 | 0.102 | col9a3 | -0.028 |
| ftr82 | 0.102 | foxd1 | -0.028 |
| jam2b | 0.101 | col9a2 | -0.027 |
| FRMD1 | 0.098 | six2a | -0.027 |
| gata6 | 0.095 | col11a2 | -0.027 |
| mmp11a | 0.093 | gsc | -0.027 |
| pitx2 | 0.091 | igfbp5b | -0.026 |
| si:dkey-61p9.7 | 0.091 | cspg4 | -0.026 |
| zmp:0000000650 | 0.090 | klf2a | -0.026 |
| XLOC-005272 | 0.089 | ebf1a | -0.026 |
| pth2r | 0.089 | col9a1a | -0.026 |
| sult2st1 | 0.088 | ptmaa | -0.025 |
| pcolcea | 0.087 | dlx2a | -0.025 |
| sema3e | 0.087 | sult6b1 | -0.025 |
| CU137680.1 | 0.086 | cxcl12a | -0.025 |
| crb2a | 0.086 | hpgd | -0.025 |
| CR936408.1 | 0.086 | epyc | -0.024 |
| rspo4 | 0.086 | dlx4a | -0.024 |
| cdh13 | 0.085 | vwde | -0.023 |
| BX469925.3 | 0.085 | six1a | -0.023 |
| vent | 0.084 | spon2b | -0.023 |
| col7a1l | 0.082 | tgfbi | -0.022 |
| LOC110437758 | 0.080 | cthrc1a | -0.022 |