Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-028299 | 0.178 | tuba1c | -0.020 |
| fbn2a.1 | 0.137 | gpm6aa | -0.019 |
| XLOC-005272 | 0.111 | nova2 | -0.019 |
| tmem88b | 0.103 | pvalb1 | -0.018 |
| jam2b | 0.100 | pvalb2 | -0.017 |
| hand2 | 0.098 | ahcy | -0.016 |
| tnni1b | 0.098 | ckbb | -0.016 |
| gata5 | 0.095 | fabp7a | -0.016 |
| LOC103909472 | 0.095 | si:ch211-137a8.4 | -0.016 |
| BX469925.3 | 0.091 | actc1b | -0.015 |
| tnnt2a | 0.085 | gpm6ab | -0.015 |
| clec19a | 0.084 | rtn1a | -0.015 |
| pcolcea | 0.081 | stmn1b | -0.015 |
| pth2r | 0.076 | tmsb | -0.015 |
| si:dkey-12j5.1 | 0.070 | tuba1a | -0.015 |
| ftr82 | 0.068 | CU467822.1 | -0.014 |
| LOC101887118 | 0.068 | elavl3 | -0.014 |
| XLOC-023369 | 0.068 | gapdhs | -0.014 |
| cmlc1 | 0.067 | cspg5a | -0.013 |
| nkx2.7 | 0.066 | fabp3 | -0.013 |
| fn1a | 0.065 | rnasekb | -0.013 |
| bmp6 | 0.062 | XLOC-003690 | -0.013 |
| lsp1 | 0.062 | CU634008.1 | -0.013 |
| fgf10b | 0.061 | her4.2 | -0.013 |
| tbx5a | 0.061 | dla | -0.012 |
| CU137680.1 | 0.060 | krtt1c19e | -0.012 |
| gata6 | 0.060 | mdh1aa | -0.012 |
| tpm4a | 0.060 | mylpfa | -0.012 |
| XLOC-015407 | 0.060 | pou3f1 | -0.012 |
| CABZ01109081.1 | 0.059 | si:dkey-276j7.1 | -0.012 |
| myl7 | 0.059 | XLOC-003689 | -0.012 |
| pitx1 | 0.059 | XLOC-003692 | -0.012 |
| sfrp5 | 0.059 | abhd6a | -0.012 |
| XLOC-040364 | 0.058 | her15.1 | -0.012 |
| cnn2 | 0.056 | cadm3 | -0.011 |