Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-028299 | 0.095 | gapdhs | -0.021 |
| tnni1b | 0.086 | icn | -0.021 |
| nkx2.5 | 0.076 | pvalb1 | -0.020 |
| tmem88b | 0.075 | pvalb2 | -0.020 |
| fbn2a.1 | 0.073 | cyt1 | -0.019 |
| gata5 | 0.068 | krt4 | -0.019 |
| hand2 | 0.068 | krtt1c19e | -0.019 |
| XLOC-005272 | 0.064 | tuba1c | -0.019 |
| BX005396.3 | 0.060 | atp5if1b | -0.018 |
| gata6 | 0.060 | ckbb | -0.018 |
| cdx4 | 0.058 | gpm6ab | -0.018 |
| jam2b | 0.057 | pycard | -0.018 |
| ved | 0.057 | ccni | -0.017 |
| vox | 0.056 | cyt1l | -0.017 |
| hspb1 | 0.053 | gpm6aa | -0.017 |
| her1 | 0.053 | icn2 | -0.017 |
| cdx1a | 0.052 | krt5 | -0.017 |
| msgn1 | 0.052 | si:ch211-195b11.3 | -0.017 |
| BX469925.3 | 0.051 | calm1a | -0.017 |
| cracr2b | 0.050 | anxa1a | -0.016 |
| her7 | 0.050 | gng3 | -0.016 |
| mmel1 | 0.049 | hbbe1.3 | -0.016 |
| fgf10b | 0.048 | krt91 | -0.016 |
| tnnt2a | 0.048 | rnasekb | -0.016 |
| bambia | 0.047 | s100a10b | -0.016 |
| colec11 | 0.047 | sncb | -0.016 |
| tbx16l | 0.047 | stmn1b | -0.016 |
| gdf3 | 0.046 | wu:fb18f06 | -0.016 |
| LOC101887118 | 0.046 | atp6v1e1b | -0.015 |
| apoc1 | 0.045 | eef1da | -0.015 |
| fn1a | 0.045 | fbp1a | -0.015 |
| FITM1 (1 of many) | 0.045 | hbae3 | -0.015 |
| sall4 | 0.045 | s100v1 | -0.015 |
| si:dkey-261h17.1 | 0.045 | si:ch211-105c13.3 | -0.015 |
| bmp6 | 0.044 | tmsb | -0.015 |