Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tnni1b | 0.231 | col1a2 | -0.051 |
| XLOC-028299 | 0.216 | eef1da | -0.049 |
| cracr2b | 0.201 | col1a1a | -0.047 |
| gdf3 | 0.193 | sparc | -0.045 |
| fbn2a.1 | 0.183 | rbp4 | -0.043 |
| BX005396.3 | 0.161 | tgfbi | -0.042 |
| tmem88b | 0.160 | cnmd | -0.041 |
| gata5 | 0.160 | pvalb1 | -0.040 |
| gata6 | 0.155 | col9a1a | -0.040 |
| XLOC-005272 | 0.150 | fibina | -0.039 |
| tnnt2a | 0.148 | col9a2 | -0.038 |
| si:dkeyp-46h3.2 | 0.146 | col2a1a | -0.038 |
| nkx2.5 | 0.145 | col5a1 | -0.038 |
| crb2a | 0.136 | pvalb2 | -0.038 |
| si:ch211-247i17.1 | 0.134 | col2a1b | -0.037 |
| nkx2.7 | 0.134 | col9a3 | -0.037 |
| CU137680.1 | 0.128 | cthrc1a | -0.037 |
| myl7 | 0.127 | rplp2 | -0.036 |
| pimr201 | 0.125 | hapln1a | -0.036 |
| CABZ01075068.1 | 0.122 | actc1b | -0.035 |
| BX469925.3 | 0.121 | serpinf1 | -0.035 |
| ripply3 | 0.117 | cd82a | -0.035 |
| pln | 0.116 | CU929237.1 | -0.035 |
| cmlc1 | 0.114 | pcdh18b | -0.034 |
| LOC108191706 | 0.113 | wfdc2 | -0.034 |
| hspb1 | 0.109 | fgfbp2b | -0.034 |
| tnnc1a | 0.107 | nme2b.1 | -0.034 |
| tdgf1 | 0.107 | col11a1b | -0.033 |
| olfcs2 | 0.106 | sox9a | -0.033 |
| mmel1 | 0.106 | matn4 | -0.033 |
| ftr82 | 0.105 | ecrg4a | -0.033 |
| aanat1 | 0.103 | foxc1b | -0.033 |
| pth2r | 0.101 | col1a1b | -0.032 |
| CABZ01049362.1 | 0.101 | foxp4 | -0.032 |
| angptl6 | 0.099 | col11a1a | -0.032 |