Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| CABZ01109081.1 | 0.126 | tuba1c | -0.021 |
| XLOC-028299 | 0.087 | nova2 | -0.020 |
| tmem88b | 0.084 | elavl3 | -0.019 |
| fbn2a.1 | 0.076 | gpm6aa | -0.019 |
| jam2b | 0.072 | si:ch211-137a8.4 | -0.018 |
| BX005396.3 | 0.068 | rtn1a | -0.017 |
| pitx1 | 0.068 | stmn1b | -0.017 |
| pth2r | 0.067 | tmsb | -0.017 |
| pcolcea | 0.064 | ckbb | -0.016 |
| gata5 | 0.061 | tuba1a | -0.016 |
| ftr82 | 0.057 | CU467822.1 | -0.015 |
| lsp1 | 0.056 | myt1a | -0.015 |
| hand2 | 0.055 | myt1b | -0.015 |
| tpm4a | 0.055 | si:dkey-276j7.1 | -0.015 |
| cdon | 0.053 | CU634008.1 | -0.015 |
| sema3e | 0.052 | gpm6ab | -0.014 |
| tnni1b | 0.052 | hes6 | -0.014 |
| BX469925.3 | 0.051 | LOC798783 | -0.014 |
| smad9 | 0.049 | scrt2 | -0.014 |
| XLOC-005272 | 0.049 | cadm3 | -0.013 |
| gata6 | 0.048 | fabp3 | -0.013 |
| alx4a | 0.047 | gng3 | -0.013 |
| CABZ01027646.1 | 0.047 | insm1a | -0.013 |
| fn1a | 0.047 | pou3f1 | -0.013 |
| msx3 | 0.047 | pvalb1 | -0.013 |
| bmp6 | 0.046 | si:ch73-21g5.7 | -0.013 |
| c1qtnf12 | 0.046 | her4.2 | -0.013 |
| clec19a | 0.046 | actc1b | -0.012 |
| colec11 | 0.046 | dla | -0.012 |
| pitx2 | 0.046 | dlb | -0.012 |
| bambia | 0.045 | epb41a | -0.012 |
| fmoda | 0.045 | fabp7a | -0.012 |
| cnn2 | 0.044 | fez1 | -0.012 |
| cyr61 | 0.044 | gadd45gb.1 | -0.012 |
| FRMD1 | 0.044 | gapdhs | -0.012 |