| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-003375 | 0.215 | col2a1a | -0.124 |
| si:ch211-158m24.12 | 0.195 | col11a1a | -0.119 |
| ccdc65 | 0.195 | col9a1b | -0.116 |
| aplnr2 | 0.186 | col9a3 | -0.114 |
| cyp2aa6 | 0.186 | zmp:0000000760 | -0.114 |
| wnt2bb | 0.185 | si:ch73-23l24.1 | -0.113 |
| nradd | 0.183 | cmn | -0.112 |
| fgf8a | 0.174 | zgc:113232 | -0.110 |
| hoxb10a | 0.174 | sparc | -0.108 |
| htr5aa | 0.173 | col9a2 | -0.108 |
| lrrc17 | 0.168 | col8a1a | -0.106 |
| XLOC-023594 | 0.168 | cnmd | -0.106 |
| her12 | 0.167 | col11a2 | -0.100 |
| LOC101886997 | 0.167 | epyc | -0.098 |
| XLOC-021400 | 0.167 | krt18a.1 | -0.093 |
| gdf11 | 0.166 | agtrap | -0.093 |
| LOC108179111 | 0.163 | zgc:162730 | -0.092 |
| XLOC-002238 | 0.160 | ucmab | -0.092 |
| cdx4 | 0.159 | col2a1b | -0.089 |
| BX005443.1 | 0.158 | rpl37 | -0.088 |
| hoxd13a | 0.152 | zgc:114188 | -0.087 |
| sp5l | 0.152 | selenom | -0.087 |
| fam49al | 0.151 | matn3a | -0.087 |
| myclb | 0.149 | rps10 | -0.087 |
| BX005254.3 | 0.148 | krt5 | -0.085 |
| dhrs3b | 0.145 | si:dkey-12l12.1 | -0.084 |
| rab36 | 0.143 | krt8 | -0.083 |
| hoxa9a | 0.142 | susd5 | -0.082 |
| hes6 | 0.141 | snorc | -0.082 |
| noto | 0.140 | haus7 | -0.082 |
| si:dkey-192l18.9 | 0.140 | btg1 | -0.081 |
| LOC108182677 | 0.140 | matn3b | -0.080 |
| fgf3 | 0.139 | tgfb3 | -0.080 |
| hoxd12a | 0.138 | loxl1 | -0.080 |
| lrriq1 | 0.138 | si:dkey-31g6.6 | -0.079 |