| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdx4 | 0.352 | prdx2 | -0.138 |
| tbx16 | 0.309 | blvrb | -0.116 |
| cdx1a | 0.288 | hbae1.1 | -0.114 |
| vox | 0.284 | hbbe1.3 | -0.108 |
| cx43.4 | 0.279 | hbae1.3 | -0.105 |
| tbxta | 0.261 | hbae3 | -0.105 |
| her7 | 0.254 | hemgn | -0.105 |
| msgn1 | 0.243 | cahz | -0.101 |
| mfap2 | 0.231 | zgc:163057 | -0.100 |
| hspb1 | 0.226 | tspo | -0.098 |
| hes6 | 0.216 | slc4a1a | -0.098 |
| hoxb10a | 0.213 | hbbe1.1 | -0.097 |
| eve1 | 0.211 | hbbe2 | -0.097 |
| hoxc3a | 0.210 | alas2 | -0.096 |
| apela | 0.203 | hbbe1.2 | -0.093 |
| BX005254.3 | 0.200 | tmem14ca | -0.091 |
| fkbp7 | 0.197 | nt5c2l1 | -0.090 |
| id1 | 0.196 | nmt1b | -0.085 |
| BX927327.1 | 0.195 | hbbe3 | -0.083 |
| tspan7 | 0.193 | epb41b | -0.082 |
| hoxb7a | 0.191 | gpx1a | -0.080 |
| ved | 0.190 | creg1 | -0.077 |
| dact2 | 0.190 | urod | -0.076 |
| serpinh1b | 0.190 | si:ch211-207c6.2 | -0.075 |
| nucks1a | 0.190 | hdr | -0.075 |
| col5a1 | 0.185 | plac8l1 | -0.073 |
| ctnnb1 | 0.185 | hbae5 | -0.072 |
| marcksb | 0.184 | uros | -0.071 |
| tbxtb | 0.182 | si:ch211-227m13.1 | -0.070 |
| col1a2 | 0.181 | tmod4 | -0.069 |
| si:ch73-281n10.2 | 0.180 | rfesd | -0.069 |
| szl | 0.177 | tfr1a | -0.068 |
| vent | 0.175 | hmbsb | -0.067 |
| pmp22a | 0.174 | gp1bb | -0.067 |
| sparc | 0.174 | si:ch73-248e21.7 | -0.067 |