| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb5a | 0.158 | krt5 | -0.121 |
| pitx1 | 0.134 | krtt1c19e | -0.120 |
| shha | 0.132 | rbp4 | -0.111 |
| sox2 | 0.127 | cyt1 | -0.109 |
| foxa1 | 0.126 | si:dkey-33c14.3 | -0.106 |
| pitx2 | 0.124 | col1a1a | -0.099 |
| fabp2 | 0.124 | col1a1b | -0.099 |
| krt18a.1 | 0.121 | lgals1l1 | -0.099 |
| foxa2 | 0.119 | zgc:136930 | -0.097 |
| wnt11r | 0.117 | anxa1a | -0.097 |
| hoxb5b | 0.106 | si:dkey-16p21.8 | -0.097 |
| shhb | 0.105 | zgc:175088 | -0.095 |
| sox11b | 0.105 | col1a2 | -0.094 |
| khdrbs1a | 0.104 | col11a1a | -0.094 |
| aicda | 0.103 | aep1 | -0.094 |
| si:ch211-222l21.1 | 0.102 | wu:fa03e10 | -0.091 |
| si:dkey-42i9.4 | 0.102 | si:dkey-183i3.5 | -0.091 |
| hmgb2b | 0.102 | col2a1b | -0.090 |
| hmga1a | 0.102 | spaca4l | -0.090 |
| BX649559.1 | 0.100 | cxl34b.11 | -0.088 |
| snrpb | 0.100 | col14a1b | -0.086 |
| h3f3d | 0.099 | col17a1a | -0.086 |
| ppid | 0.098 | itgb1b.2 | -0.083 |
| seta | 0.097 | postnb | -0.082 |
| hoxb3a | 0.097 | cyt1l | -0.081 |
| snrpf | 0.097 | cotl1 | -0.081 |
| snrpe | 0.097 | pfn1 | -0.080 |
| apex1 | 0.096 | tmsb1 | -0.080 |
| hdac1 | 0.095 | s100a10b | -0.078 |
| hoxb8a | 0.095 | ak1 | -0.078 |
| si:ch73-144d13.8 | 0.095 | thy1 | -0.077 |
| h2afvb | 0.095 | kera | -0.077 |
| cirbpa | 0.094 | sparc | -0.077 |
| syncrip | 0.094 | wu:fb18f06 | -0.077 |
| hnrnpa0b | 0.094 | DSG2 | -0.076 |