| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| tectb | 0.265 | lmx1bb | -0.117 |
| glula | 0.239 | dlx3b | -0.114 |
| fgf20a | 0.233 | matn4 | -0.102 |
| atoh1a | 0.222 | sfrp5 | -0.102 |
| otog | 0.221 | ahnak | -0.101 |
| kitlga | 0.217 | si:ch211-80h18.1 | -0.100 |
| mb | 0.215 | ftr82 | -0.099 |
| tecta | 0.212 | ctgfa | -0.098 |
| hhla1 | 0.211 | krt8 | -0.097 |
| zpld1a | 0.211 | fgfr2 | -0.095 |
| her4.2 | 0.202 | frem3 | -0.095 |
| XLOC-003690 | 0.195 | cldna | -0.093 |
| si:ch211-243g18.2 | 0.194 | col9a1b | -0.091 |
| rasd4 | 0.192 | serpinh1b | -0.089 |
| nfasca | 0.192 | qkia | -0.088 |
| sox2 | 0.188 | dlx4b | -0.087 |
| slc1a3a | 0.187 | metrnla | -0.085 |
| hes6 | 0.186 | tfap2a | -0.082 |
| lfng | 0.182 | tmsb4x | -0.082 |
| fabp7a | 0.179 | krt18a.1 | -0.082 |
| six1b | 0.179 | lrp2a | -0.082 |
| dusp14 | 0.178 | mdka | -0.081 |
| zwi | 0.177 | wnt2 | -0.081 |
| dld | 0.177 | vgll4l | -0.079 |
| her4.1 | 0.177 | wfdc2 | -0.079 |
| cx30.3 | 0.174 | fstl1b | -0.078 |
| slc25a22b | 0.174 | tuba8l | -0.075 |
| isl1 | 0.174 | mycn | -0.075 |
| ebf3a | 0.173 | si:dkey-195m11.8 | -0.074 |
| gfi1ab | 0.173 | gpx3 | -0.073 |
| slc13a5a | 0.172 | nid2a | -0.073 |
| rbm24a | 0.171 | mcama | -0.073 |
| vsig8a | 0.166 | tspan4a | -0.072 |
| srrm4 | 0.164 | tnfsf10 | -0.072 |
| klhl24a | 0.163 | emilin1a | -0.072 |