southpaw
ZFIN 
Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| LOC570185 | 0.199 | fabp3 | -0.036 |
| LOC101884963 | 0.146 | actc1b | -0.033 |
| FP015860.1 | 0.108 | cox7c | -0.032 |
| XLOC-020303 | 0.108 | ttn.2 | -0.031 |
| hoxd10a | 0.099 | sparc | -0.030 |
| htr5aa | 0.098 | bhmt | -0.030 |
| fbln1 | 0.095 | vwde | -0.030 |
| tnfrsf9a | 0.095 | gapdh | -0.030 |
| hand2 | 0.094 | ak1 | -0.030 |
| her1 | 0.088 | pabpc4 | -0.029 |
| itm2cb | 0.087 | gamt | -0.029 |
| msgn1 | 0.087 | aldoab | -0.029 |
| fgf10b | 0.087 | ckma | -0.029 |
| si:ch211-66h3.4 | 0.084 | atp2a1 | -0.029 |
| opn4a | 0.083 | ckmb | -0.029 |
| her7 | 0.083 | cox17 | -0.029 |
| pimr135 | 0.083 | rplp2 | -0.028 |
| dapp1 | 0.082 | mylpfa | -0.028 |
| si:dkeyp-118a3.2 | 0.082 | tmem38a | -0.027 |
| hoxb10a | 0.081 | tnnc2 | -0.027 |
| fbn2a.1 | 0.080 | six1b | -0.027 |
| her12 | 0.080 | acta1b | -0.027 |
| tbx16l | 0.079 | aldh7a1 | -0.027 |
| has2 | 0.079 | eno1a | -0.027 |
| alpi.1 | 0.079 | atp5if1b | -0.027 |
| ponzr4 | 0.079 | neb | -0.027 |
| LOC101885472 | 0.079 | gatm | -0.026 |
| LOC100334288 | 0.076 | ldb3a | -0.026 |
| nid2a | 0.076 | uqcr10 | -0.026 |
| fn1a | 0.075 | srl | -0.026 |
| ism1 | 0.073 | eef1da | -0.026 |
| hoxc11a | 0.073 | tpma | -0.026 |
| LOC103909118 | 0.072 | uqcrq | -0.026 |
| hoxa11a | 0.072 | ndufs4 | -0.026 |
| CR931763.1 | 0.071 | nme2b.2 | -0.025 |