| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| shha | 0.333 | elavl3 | -0.166 |
| spon1b | 0.317 | ptmaa | -0.162 |
| ntn1b | 0.312 | myt1b | -0.152 |
| shhb | 0.303 | stmn1b | -0.142 |
| ctgfa | 0.293 | rtn1a | -0.129 |
| sulf1 | 0.288 | gng3 | -0.128 |
| col8a1a | 0.279 | ptmab | -0.127 |
| myl9a | 0.278 | stxbp1a | -0.125 |
| slit1b | 0.276 | sncb | -0.125 |
| col9a3 | 0.273 | elavl4 | -0.124 |
| arxa | 0.271 | stx1b | -0.124 |
| npr3 | 0.265 | tmsb | -0.119 |
| clu | 0.261 | snap25a | -0.117 |
| aplnr2 | 0.259 | cplx2 | -0.117 |
| cyr61l2 | 0.258 | rtn1b | -0.117 |
| col9a2 | 0.258 | gng2 | -0.114 |
| slit2 | 0.257 | vamp2 | -0.114 |
| optc | 0.255 | hoxb9a | -0.113 |
| foxa2 | 0.254 | ywhah | -0.113 |
| foxa | 0.251 | nsg2 | -0.112 |
| foxa1 | 0.247 | si:dkey-276j7.1 | -0.111 |
| col11a1a | 0.246 | scrt2 | -0.111 |
| lcn15 | 0.236 | syt2a | -0.110 |
| metrnla | 0.236 | onecut1 | -0.110 |
| tbata | 0.235 | ywhag2 | -0.110 |
| bicc2 | 0.234 | myt1a | -0.110 |
| scospondin | 0.231 | golga7ba | -0.108 |
| vasna | 0.230 | gpm6ab | -0.108 |
| trabd2b | 0.228 | jagn1a | -0.108 |
| col5a1 | 0.224 | tmem59l | -0.108 |
| col2a1a | 0.224 | stmn2a | -0.107 |
| fxyd1 | 0.222 | rbfox1 | -0.106 |
| loxl5b | 0.222 | LOC100537384 | -0.105 |
| si:dkey-208c12.2 | 0.220 | onecut2 | -0.104 |
| krt8 | 0.214 | zc4h2 | -0.104 |