| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc11a | 0.138 | foxc1a | -0.058 |
| clec19a | 0.138 | cthrc1a | -0.055 |
| zmp:0000000846 | 0.125 | cnmd | -0.047 |
| hoxd12a | 0.114 | tgfbi | -0.044 |
| hoxd11a | 0.111 | foxd1 | -0.040 |
| gpc1a | 0.108 | col9a1a | -0.040 |
| hoxd10a | 0.100 | col9a2 | -0.040 |
| LOC100535130 | 0.099 | cd248b | -0.038 |
| hoxd9a | 0.099 | her9 | -0.038 |
| crabp2a | 0.096 | fxyd1 | -0.037 |
| evx1 | 0.096 | col2a1a | -0.037 |
| capn12 | 0.094 | zic2a | -0.035 |
| vstm4a | 0.089 | six2a | -0.033 |
| aqp3b | 0.089 | epyc | -0.033 |
| fstb | 0.087 | otos | -0.032 |
| col6a2 | 0.086 | col9a3 | -0.031 |
| col6a1 | 0.085 | col11a2 | -0.030 |
| hoxa11a | 0.084 | foxc1b | -0.030 |
| hoxa13a | 0.083 | col11a1a | -0.029 |
| crabp1b | 0.083 | si:ch73-86n18.1 | -0.029 |
| mylk5 | 0.082 | hey1 | -0.029 |
| hand2 | 0.081 | si:dkeyp-106c3.1 | -0.029 |
| emilin2b | 0.081 | igfbp2a | -0.029 |
| si:ch211-67e16.11 | 0.080 | apof | -0.029 |
| col5a2a | 0.078 | si:dkey-6n6.1 | -0.029 |
| hoxc13a | 0.077 | mia | -0.029 |
| ccdc3a | 0.077 | hapln1a | -0.029 |
| c1qtnf5 | 0.077 | atp1b4 | -0.028 |
| hoxc11b | 0.076 | AL929222.2 | -0.027 |
| lrrc17 | 0.075 | dlx4b | -0.026 |
| abi3bpb | 0.075 | sox9a | -0.026 |
| eomesa | 0.075 | dlx3b | -0.025 |
| col6a3 | 0.075 | zeb2a | -0.025 |
| prrx1b | 0.075 | cfi | -0.025 |
| CABZ01074130.1 | 0.075 | snorc | -0.025 |