Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| c1qtnf5 | 0.340 | XLOC-003690 | -0.034 |
| CABZ01074130.1 | 0.337 | XLOC-003689 | -0.033 |
| LOC100538221 | 0.315 | her15.1 | -0.033 |
| hoxb13a | 0.281 | si:ch211-137a8.4 | -0.032 |
| hoxa13a | 0.248 | snrpf | -0.032 |
| and1 | 0.243 | apex1 | -0.029 |
| and4 | 0.235 | ddx39ab | -0.029 |
| hoxc13a | 0.232 | sox3 | -0.029 |
| hoxc13b | 0.227 | XLOC-003692 | -0.029 |
| hoxa13b | 0.216 | snrpd1 | -0.028 |
| si:dkey-202e22.2 | 0.203 | alyref | -0.027 |
| mxra5b | 0.196 | cbx3a | -0.027 |
| loxa | 0.195 | cldn5a | -0.027 |
| and2 | 0.189 | her12 | -0.027 |
| col1a1a | 0.179 | msi1 | -0.027 |
| fbln1 | 0.170 | si:dkey-56m19.5 | -0.027 |
| hgd | 0.160 | snrpe | -0.027 |
| hpdb | 0.158 | snrpb | -0.026 |
| im:7150988 | 0.150 | tuba1a | -0.026 |
| colgalt2 | 0.149 | her4.2 | -0.026 |
| crabp2a | 0.149 | marcksb | -0.025 |
| zmp:0000000846 | 0.146 | ptges3b | -0.025 |
| spon2b | 0.145 | rrm1 | -0.025 |
| ogna | 0.143 | seta | -0.025 |
| zgc:66479 | 0.139 | snrpd2 | -0.025 |
| dcn | 0.138 | abhd6a | -0.025 |
| grem1b | 0.135 | dla | -0.024 |
| ttc36 | 0.133 | hmgb3b | -0.024 |
| mxra8b | 0.130 | notch3 | -0.024 |
| kazald3 | 0.128 | pfdn4 | -0.024 |
| ptx3a | 0.124 | snrpg | -0.024 |
| mxra8a | 0.122 | sox11b | -0.024 |
| omd | 0.122 | gfap | -0.023 |
| prrx1a | 0.122 | h2afva | -0.023 |
| serpinf1 | 0.122 | hdac1 | -0.023 |