| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| cdx4 | 0.156 | cnmd | -0.048 |
| wu:fb97g03 | 0.128 | fxyd1 | -0.048 |
| emilin2b | 0.115 | col2a1a | -0.044 |
| BX001014.2 | 0.105 | col11a2 | -0.041 |
| fbln1 | 0.105 | foxc1a | -0.041 |
| BX005254.3 | 0.104 | col9a2 | -0.040 |
| cfd | 0.102 | epyc | -0.038 |
| fzd2 | 0.099 | otos | -0.038 |
| clec19a | 0.098 | mia | -0.037 |
| col6a4a | 0.096 | col9a3 | -0.035 |
| hoxb10a | 0.095 | si:dkeyp-106c3.1 | -0.035 |
| col6a1 | 0.090 | emilin3a | -0.035 |
| col6a2 | 0.089 | ucmab | -0.035 |
| foxq1a | 0.089 | fgfbp2b | -0.034 |
| znfl2a | 0.088 | col9a1a | -0.034 |
| BX469925.3 | 0.088 | zic2a | -0.034 |
| fbn2a.1 | 0.086 | si:dkey-6n6.1 | -0.034 |
| entpd1 | 0.084 | snorc | -0.033 |
| fgf10b | 0.084 | wisp3 | -0.033 |
| si:dkey-202e22.2 | 0.082 | apof | -0.033 |
| foxl1 | 0.081 | sox9a | -0.032 |
| hoxc11a | 0.079 | acana | -0.032 |
| twist2 | 0.077 | matn1 | -0.031 |
| vox | 0.076 | ppp1r1c | -0.031 |
| svild | 0.075 | cthrc1a | -0.030 |
| si:ch211-106h4.12 | 0.075 | col11a1a | -0.030 |
| foxf2a | 0.074 | tfpia | -0.029 |
| mfap2 | 0.073 | zic1 | -0.029 |
| lrrc17 | 0.071 | cdo1 | -0.028 |
| hoxb9a | 0.070 | si:ch211-106h11.3 | -0.028 |
| LOC101887118 | 0.067 | ebf3a | -0.028 |
| slc6a3 | 0.067 | eps8l2 | -0.028 |
| hoxd10a | 0.066 | zgc:162879 | -0.028 |
| hoxb7a | 0.064 | ptgdsa | -0.027 |
| hoxa9a | 0.064 | tnxba | -0.027 |