Gene expression UMAP
Other cell groups
all cells |
blastomeres |
PGCs |
endoderm |
axial mesoderm |
muscle  |
mural cells / non-skeletal muscle  |
mesenchyme  |
hematopoietic / vasculature  |
pronephros  |
neural |
spinal cord / glia |
eye |
taste / olfactory |
otic / lateral line |
epidermis |
periderm |
fin |
ionocytes / mucous |
pigment cells |
Expression by stage/cluster
Correlated gene expression
| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxd9a | 0.091 | actb2 | -0.073 |
| hoxd10a | 0.090 | fabp7a | -0.067 |
| snap25a | 0.089 | id1 | -0.056 |
| hoxb9a | 0.086 | actb1 | -0.053 |
| elavl4 | 0.082 | cd82a | -0.052 |
| hoxa9b | 0.078 | cd63 | -0.051 |
| pik3r3b | 0.078 | eef1a1l1 | -0.050 |
| hoxd3a | 0.077 | XLOC-003690 | -0.049 |
| olfm1b | 0.077 | msi1 | -0.048 |
| sncgb | 0.076 | gpm6bb | -0.047 |
| sncb | 0.076 | vamp3 | -0.047 |
| stxbp1a | 0.075 | tubb4b | -0.046 |
| hoxa10b | 0.072 | ppap2d | -0.044 |
| gpr85 | 0.072 | gng5 | -0.044 |
| hoxb10a | 0.071 | COX7A2 (1 of many) | -0.044 |
| hoxa11b | 0.071 | zgc:56493 | -0.044 |
| hoxa9a | 0.071 | si:dkey-7j14.6 | -0.044 |
| rbfox1 | 0.070 | CR848047.1 | -0.044 |
| elavl3 | 0.069 | qki2 | -0.043 |
| rbfox3a | 0.069 | sox3 | -0.043 |
| stx1b | 0.069 | pgrmc1 | -0.043 |
| tmie | 0.068 | rpl12 | -0.043 |
| zc4h2 | 0.068 | zgc:165461 | -0.043 |
| nanos1 | 0.068 | CU467822.1 | -0.043 |
| syt2a | 0.068 | efhd1 | -0.042 |
| gng3 | 0.067 | her15.1 | -0.042 |
| vamp2 | 0.067 | ppib | -0.042 |
| tmem59l | 0.066 | mdka | -0.041 |
| palm1b | 0.065 | jun | -0.041 |
| ptmaa | 0.065 | rps2 | -0.041 |
| calm2a | 0.065 | klf6a | -0.041 |
| lhx1a | 0.064 | notch3 | -0.041 |
| hoxc9a | 0.063 | snrpb | -0.040 |
| myt1b | 0.063 | sparc | -0.040 |
| nrxn1a | 0.063 | ccng1 | -0.040 |