| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc11b | 0.248 | col9a1a | -0.069 |
| hoxc12b | 0.242 | col9a2 | -0.067 |
| apela | 0.241 | col2a1a | -0.064 |
| hoxc11a | 0.204 | ecrg4a | -0.061 |
| hoxc12a | 0.159 | fgfbp2b | -0.059 |
| aplnr2 | 0.158 | col9a3 | -0.057 |
| hoxd12a | 0.154 | col11a2 | -0.055 |
| lin28a | 0.142 | si:dkey-12l12.1 | -0.051 |
| tuba8l2 | 0.141 | barx1 | -0.049 |
| nkx3-1 | 0.138 | cnmd | -0.049 |
| si:ch211-286o17.1 | 0.131 | col11a1a | -0.049 |
| hoxc10a | 0.130 | epyc | -0.046 |
| hoxa11a | 0.128 | cldn11a | -0.045 |
| hoxd11a | 0.122 | pdgfrl | -0.045 |
| pax9 | 0.121 | dlx5a | -0.043 |
| r3hdml | 0.117 | VIT | -0.043 |
| hoxb9a | 0.116 | col8a2 | -0.042 |
| si:dkey-238c7.16 | 0.115 | otos | -0.042 |
| CABZ01075068.1 | 0.111 | matn1 | -0.041 |
| hoxa11b | 0.108 | ogna | -0.041 |
| zmp:0000000846 | 0.106 | apoa2 | -0.041 |
| hoxb10a | 0.105 | nfia | -0.041 |
| emilin2b | 0.105 | chd3 | -0.041 |
| ebf2 | 0.105 | si:ch211-156j16.1 | -0.041 |
| nog1 | 0.105 | ucmab | -0.040 |
| si:dkey-195m11.8 | 0.104 | LOC101883507 | -0.040 |
| c1qtnf12 | 0.104 | prss35 | -0.040 |
| crabp2a | 0.104 | nanos1 | -0.039 |
| zgc:154093 | 0.100 | angptl1a | -0.039 |
| tpm4a | 0.100 | AL929222.2 | -0.039 |
| tlx2 | 0.099 | zgc:162612 | -0.039 |
| sept15 | 0.099 | sox9a | -0.038 |
| clec19a | 0.098 | fstl3 | -0.038 |
| postnb | 0.095 | emx2 | -0.038 |
| meis1a | 0.093 | socs3a | -0.038 |