| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| dkk1b | 0.447 | sox3 | -0.259 |
| lhx1a | 0.413 | id1 | -0.247 |
| lft2 | 0.411 | cxcr4b | -0.201 |
| gata5 | 0.386 | sox19a | -0.180 |
| gata6 | 0.385 | asb11 | -0.156 |
| pitx2 | 0.375 | zic2b | -0.155 |
| osr1 | 0.355 | si:ch1073-80i24.3 | -0.144 |
| dusp4 | 0.323 | aldob | -0.137 |
| fgf8a | 0.322 | cited4b | -0.122 |
| mespab | 0.319 | sb:cb81 | -0.118 |
| FP102169.1 | 0.319 | foxd5 | -0.114 |
| ism1 | 0.316 | inka1a | -0.111 |
| fgf3 | 0.313 | nnr | -0.094 |
| foxa | 0.309 | atp1b1a | -0.089 |
| trib3 | 0.307 | foxh1 | -0.089 |
| efnb2a | 0.305 | pfkfb4b | -0.088 |
| zic2a | 0.301 | si:dkey-56m19.5 | -0.086 |
| sox32 | 0.301 | mych | -0.083 |
| sp5a | 0.294 | sox2 | -0.083 |
| msgn1 | 0.293 | gpd1b | -0.080 |
| ndr1 | 0.293 | mex3b | -0.077 |
| aplnrb | 0.293 | hmgb2a | -0.076 |
| kirrel3l | 0.286 | si:ch73-1a9.3 | -0.076 |
| efna1a | 0.280 | cx43.4 | -0.074 |
| elovl6 | 0.276 | polr3gla | -0.074 |
| lft1 | 0.273 | glulb | -0.073 |
| efnb2b | 0.271 | cxcr4a | -0.073 |
| ndr2 | 0.268 | si:ch211-152c2.3 | -0.072 |
| BX927327.1 | 0.268 | hirip3 | -0.072 |
| sebox | 0.267 | si:ch211-170d8.2 | -0.069 |
| s1pr5a | 0.258 | foxd3 | -0.066 |
| foxa2 | 0.258 | add3b | -0.066 |
| flrt3 | 0.257 | gadd45ga | -0.064 |
| rnd1b | 0.256 | her8a | -0.063 |
| wnt11f2 | 0.253 | shisa2a | -0.063 |