| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| irx5a | 0.236 | barx1 | -0.063 |
| nkx2.5 | 0.111 | ecrg4a | -0.061 |
| nkx2.7 | 0.106 | si:ch211-156j16.1 | -0.052 |
| tmem88b | 0.103 | dlx2a | -0.051 |
| gdf3 | 0.090 | fgfbp2b | -0.050 |
| irx3b | 0.083 | dlx3b | -0.048 |
| ripply3 | 0.082 | dlx4b | -0.048 |
| tmem88a | 0.079 | dlx5a | -0.047 |
| zbtb16a | 0.079 | col8a2 | -0.047 |
| prdm1a | 0.077 | dlx1a | -0.047 |
| tcf21 | 0.075 | dlx4a | -0.046 |
| tbx1 | 0.072 | rbp4 | -0.044 |
| pln | 0.072 | zgc:162612 | -0.044 |
| meis2b | 0.071 | pax9 | -0.042 |
| cracr2b | 0.070 | pvalb1 | -0.040 |
| fsta | 0.068 | pvalb2 | -0.040 |
| marcksl1a | 0.067 | anxa1a | -0.038 |
| nova2 | 0.066 | fxyd1 | -0.036 |
| isl2b | 0.064 | foxd1 | -0.036 |
| CABZ01075068.1 | 0.063 | emilin2b | -0.036 |
| akap12b | 0.062 | hapln1a | -0.035 |
| raraa | 0.062 | cyp1d1 | -0.035 |
| arl4aa | 0.062 | foxc1b | -0.035 |
| fzd7a | 0.061 | c1qtnf6a | -0.034 |
| marcksl1b | 0.061 | sult6b1 | -0.033 |
| hspb1 | 0.060 | grem2b | -0.033 |
| ctnnb1 | 0.060 | eef1da | -0.032 |
| meis3 | 0.060 | prss59.2 | -0.031 |
| mmel1 | 0.060 | foxd2 | -0.031 |
| gata5 | 0.060 | prss59.1 | -0.030 |
| XLOC-015407 | 0.059 | foxl1 | -0.030 |
| thbs3b | 0.059 | wfdc2 | -0.030 |
| marcksb | 0.059 | aldob | -0.030 |
| prrx1a | 0.058 | mab21l2 | -0.030 |
| si:ch211-212k18.5 | 0.058 | dlx6a | -0.030 |