| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nkx2.4b | 0.151 | tuba1c | -0.052 |
| nkx2.4a | 0.148 | tubb2b | -0.048 |
| shha | 0.115 | ptmaa | -0.044 |
| pitx2 | 0.103 | rtn1a | -0.043 |
| tmem88b | 0.088 | tmsb | -0.043 |
| LOC101883999 | 0.084 | elavl3 | -0.042 |
| si:ch211-234p6.5 | 0.084 | tmeff1b | -0.041 |
| si:ch211-214p13.3 | 0.084 | hoxb3a | -0.041 |
| CABZ01068367.1 | 0.083 | meis1b | -0.041 |
| pmp22b | 0.082 | ptmab | -0.040 |
| krt18b | 0.081 | elavl4 | -0.040 |
| optc | 0.080 | pax3a | -0.039 |
| depdc7a | 0.080 | hoxb9a | -0.039 |
| cd59 | 0.078 | gng3 | -0.039 |
| egr2b | 0.078 | hnrnpa0a | -0.038 |
| LOC103911713 | 0.077 | hnrnpaba | -0.037 |
| LOC108191530 | 0.077 | si:ch73-1a9.3 | -0.037 |
| matn4 | 0.076 | stxbp1a | -0.037 |
| si:dkey-261j4.4 | 0.075 | snap25a | -0.036 |
| LOC108189376 | 0.075 | hmgb1b | -0.036 |
| shhb | 0.074 | hoxd3a | -0.036 |
| col9a3 | 0.074 | chd4a | -0.035 |
| LOC103909649 | 0.073 | syt2a | -0.035 |
| wnt16 | 0.072 | nova2 | -0.035 |
| phlda2 | 0.072 | sncb | -0.034 |
| asmtl | 0.072 | stx1b | -0.034 |
| elovl1b | 0.072 | hmgn6 | -0.034 |
| wnt8b | 0.071 | vamp2 | -0.034 |
| mbpa | 0.071 | marcksb | -0.033 |
| irx7 | 0.070 | nsg2 | -0.033 |
| sc:d0284 | 0.070 | cplx2 | -0.033 |
| gldn | 0.069 | cplx2l | -0.033 |
| zgc:153012 | 0.069 | hmgb3a | -0.033 |
| stxbp6 | 0.068 | ywhag2 | -0.033 |
| col9a1b | 0.067 | myt1b | -0.033 |