| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| nkx2.4b | 0.209 | stmn1b | -0.055 |
| nkx2.4a | 0.186 | rtn1a | -0.052 |
| sst1.2 | 0.159 | elavl3 | -0.049 |
| shha | 0.146 | gpm6ab | -0.045 |
| id3 | 0.145 | gng3 | -0.043 |
| fezf2 | 0.141 | tmsb | -0.043 |
| sfrp5 | 0.133 | marcksl1b | -0.043 |
| rx3 | 0.130 | ckbb | -0.043 |
| slc9a3r1a | 0.118 | ptmaa | -0.041 |
| nkx2.1 | 0.105 | sncb | -0.039 |
| her9 | 0.096 | elavl4 | -0.039 |
| tnfaip2b | 0.089 | rtn1b | -0.039 |
| jdp2b | 0.088 | atp6v0cb | -0.038 |
| igf2b | 0.087 | hmgb1a | -0.037 |
| XLOC-044191 | 0.087 | stx1b | -0.036 |
| fzd8b | 0.082 | gpm6aa | -0.036 |
| zgc:174888 | 0.082 | dpysl3 | -0.036 |
| LOC110438203 | 0.081 | vamp2 | -0.036 |
| cxcl12b | 0.080 | fez1 | -0.035 |
| fosab | 0.080 | stmn2a | -0.035 |
| id1 | 0.080 | mdkb | -0.035 |
| sdc4 | 0.078 | rnasekb | -0.034 |
| ptch2 | 0.078 | atp6v1e1b | -0.034 |
| XLOC-003690 | 0.078 | stxbp1a | -0.034 |
| atf3 | 0.077 | ywhag2 | -0.034 |
| cldn5a | 0.077 | tuba1c | -0.033 |
| jun | 0.077 | snap25a | -0.033 |
| tmem88b | 0.074 | hmgb3a | -0.033 |
| si:dkeyp-110a12.4 | 0.072 | si:dkey-276j7.1 | -0.033 |
| btg2 | 0.069 | ywhah | -0.033 |
| junba | 0.067 | zc4h2 | -0.033 |
| zbtb16b | 0.067 | zgc:65894 | -0.032 |
| tpm4a | 0.067 | csdc2a | -0.032 |
| her15.1 | 0.067 | tmem59l | -0.032 |
| foxd1 | 0.066 | mllt11 | -0.031 |