| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r | 
| prdm1a | 0.130 | col9a1a | -0.054 | 
| meis3 | 0.127 | cnmd | -0.054 | 
| hoxc1a | 0.097 | col9a2 | -0.053 | 
| ripply3 | 0.085 | fibina | -0.051 | 
| hoxb1b | 0.081 | col2a1a | -0.050 | 
| apela | 0.074 | col9a3 | -0.049 | 
| hoxb5b | 0.074 | foxc1b | -0.048 | 
| dhrs3b | 0.074 | sparc | -0.047 | 
| cnr2 | 0.073 | col2a1b | -0.046 | 
| LOC103910259 | 0.072 | col11a1a | -0.046 | 
| hoxb3a | 0.071 | col1a2 | -0.044 | 
| hoxb8a | 0.070 | cthrc1a | -0.042 | 
| zgc:56699 | 0.069 | ecrg4a | -0.042 | 
| tbx2b | 0.066 | fgfbp2b | -0.040 | 
| hmga1a | 0.066 | col5a1 | -0.039 | 
| stmn1a | 0.064 | col11a2 | -0.039 | 
| LOC103911277 | 0.063 | col1a1a | -0.038 | 
| v2ra18 | 0.061 | sec61g | -0.037 | 
| si:ch211-222l21.1 | 0.061 | dcn | -0.037 | 
| CR392363.2 | 0.060 | zgc:153675 | -0.037 | 
| LOC110439713 | 0.059 | VIT | -0.036 | 
| meis2b | 0.059 | CABZ01092746.1 | -0.036 | 
| pdgfab | 0.059 | kdelr3 | -0.036 | 
| seta | 0.058 | col11a1b | -0.035 | 
| chd7 | 0.057 | zgc:162730 | -0.035 | 
| cyp26a1 | 0.057 | cdh11 | -0.035 | 
| alcamb | 0.057 | tgfb3 | -0.034 | 
| hoxa3a | 0.056 | ppdpfb | -0.033 | 
| hoxc3a | 0.055 | ucmab | -0.033 | 
| sall4 | 0.055 | col8a2 | -0.033 | 
| mycn | 0.055 | otos | -0.033 | 
| hoxd4a | 0.054 | mxra8b | -0.033 | 
| XLOC-008391 | 0.054 | serpinh1b | -0.033 | 
| rdh10a | 0.054 | cdo1 | -0.032 | 
| LOC101884649 | 0.053 | tpm1 | -0.032 |