| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxb3a | 0.275 | en2b | -0.087 |
| meis2b | 0.251 | otx2a | -0.070 |
| meis1b | 0.239 | otx1 | -0.066 |
| znf703 | 0.169 | fbl | -0.065 |
| hoxa2b | 0.168 | stm | -0.064 |
| rarga | 0.157 | si:ch211-152c2.3 | -0.063 |
| hoxc4a | 0.153 | otx2b | -0.063 |
| hoxa3a | 0.150 | tcf7l2 | -0.063 |
| egr2a | 0.147 | aldob | -0.062 |
| znf503 | 0.145 | ctnnb1 | -0.061 |
| meis2a | 0.137 | hspb1 | -0.061 |
| si:ch73-386h18.1 | 0.136 | islr2 | -0.060 |
| mab21l2 | 0.132 | dkc1 | -0.059 |
| gdf11 | 0.129 | npm1a | -0.058 |
| scrt1a | 0.129 | apoc1 | -0.058 |
| nr2f6b | 0.128 | lef1 | -0.058 |
| hoxd3a | 0.127 | nop58 | -0.057 |
| lbx2 | 0.124 | rsl1d1 | -0.057 |
| hoxb5b | 0.123 | gnl3 | -0.057 |
| epha4a | 0.119 | en2a | -0.056 |
| hoxd4a | 0.119 | apoeb | -0.055 |
| lbx1a | 0.117 | gar1 | -0.054 |
| si:ch211-57n23.4 | 0.117 | mir181b-3 | -0.054 |
| egr2b | 0.114 | nop10 | -0.054 |
| raraa | 0.112 | ddx18 | -0.054 |
| LOC101882472 | 0.112 | polr3gla | -0.054 |
| hoxc1a | 0.112 | pprc1 | -0.054 |
| hoxb5a | 0.111 | nop2 | -0.053 |
| nhlh2 | 0.108 | zmp:0000000624 | -0.053 |
| smad7 | 0.108 | nop56 | -0.053 |
| fabp3 | 0.106 | emx2 | -0.052 |
| gbx1 | 0.106 | pou5f3 | -0.052 |
| pax2a | 0.106 | ncl | -0.052 |
| elavl3 | 0.104 | snu13b | -0.052 |
| pik3r3b | 0.104 | xpr1a | -0.052 |