| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| hoxc13a | 0.699 | stm | -0.069 |
| hoxb13a | 0.632 | FQ323156.1 | -0.068 |
| hoxc13b | 0.584 | hnrnpa1a | -0.066 |
| hoxa13b | 0.472 | insb | -0.064 |
| hoxd13a | 0.418 | hspb1 | -0.061 |
| hoxc12b | 0.404 | bms1 | -0.061 |
| hoxd12a | 0.375 | si:ch211-152c2.3 | -0.061 |
| si:dkeyp-110a12.4 | 0.345 | NC-002333.4 | -0.059 |
| si:dkeyp-71f10.5 | 0.328 | zgc:110216 | -0.058 |
| lrrc17 | 0.298 | s100a1 | -0.058 |
| eve1 | 0.277 | srsf3a | -0.057 |
| hoxa11a | 0.260 | anp32e | -0.057 |
| gdf11 | 0.257 | lyar | -0.057 |
| fgf10a | 0.254 | gar1 | -0.056 |
| LOC101887111 | 0.250 | hnrnpm | -0.055 |
| crabp1b | 0.249 | akap12b | -0.055 |
| col21a1 | 0.245 | ing5b | -0.055 |
| pcp4a | 0.240 | srrm1 | -0.055 |
| hoxb10a | 0.240 | f11r.1 | -0.054 |
| dthd1 | 0.238 | nr6a1a | -0.054 |
| esrrga | 0.237 | tent5ba | -0.053 |
| prrx1b | 0.236 | aldob | -0.053 |
| hoxc10a | 0.229 | ddx18 | -0.053 |
| hoxa10b | 0.221 | si:dkey-31g6.6 | -0.052 |
| zgc:162939 | 0.216 | odc1 | -0.052 |
| zmp:0000000846 | 0.216 | ncl | -0.051 |
| hoxc12a | 0.216 | si:dkey-66i24.9 | -0.051 |
| hoxc11a | 0.216 | si:ch211-161h7.4 | -0.051 |
| her12 | 0.212 | safb | -0.050 |
| her15.1 | 0.210 | fscn1a | -0.050 |
| XLOC-032110 | 0.209 | chrd | -0.049 |
| si:ch211-51c14.1 | 0.208 | acin1b | -0.049 |
| mdh1b | 0.208 | pitx2 | -0.049 |
| bmp2a | 0.207 | tgfbi | -0.049 |
| fgf3 | 0.207 | tdgf1 | -0.049 |