| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| her3 | 0.215 | tbx16 | -0.162 |
| pkdccb | 0.160 | h1m | -0.111 |
| lhx5 | 0.154 | tbxta | -0.110 |
| sfrp1a | 0.152 | eve1 | -0.105 |
| otx2a | 0.147 | ved | -0.099 |
| aldob | 0.141 | cdx4 | -0.097 |
| prdm14 | 0.138 | ddit4 | -0.095 |
| si:ch211-152c2.3 | 0.134 | wnt11f2 | -0.095 |
| alcamb | 0.131 | dnajc1 | -0.094 |
| si:ch211-222l21.1 | 0.129 | si:dkey-261j4.5 | -0.094 |
| hmgb2a | 0.126 | lamp2 | -0.089 |
| hnrnpa0b | 0.124 | si:dkey-68o6.5 | -0.088 |
| pfkfb4b | 0.122 | npc2 | -0.088 |
| hspb1 | 0.120 | pho | -0.088 |
| otx2b | 0.116 | nanog | -0.087 |
| eef1a1l1 | 0.116 | gtf2a1 | -0.087 |
| apoeb | 0.115 | h2af1al | -0.087 |
| sox2 | 0.115 | mkrn4 | -0.086 |
| sox3 | 0.114 | syncripl | -0.085 |
| irx1b | 0.112 | acp5a | -0.085 |
| si:ch73-1a9.3 | 0.106 | aif1l | -0.084 |
| hmgn2 | 0.106 | spink2.1 | -0.083 |
| polr3gla | 0.105 | ccna1 | -0.082 |
| BX004981.1 | 0.103 | ddx4 | -0.082 |
| sox19a | 0.102 | snai1a | -0.078 |
| rpsa | 0.102 | rcor1 | -0.078 |
| h2afvb | 0.100 | prkrip1 | -0.076 |
| FQ377918.1 | 0.100 | xbp1 | -0.074 |
| si:ch211-170d8.2 | 0.100 | rasgef1ba | -0.074 |
| si:ch211-133n4.4 | 0.099 | hes6 | -0.073 |
| ptmab | 0.096 | cth1 | -0.073 |
| zic3 | 0.095 | larp7 | -0.072 |
| anp32b | 0.094 | cldnd | -0.071 |
| crtap | 0.094 | slc16a3 | -0.071 |
| rps7 | 0.093 | zgc:173742 | -0.070 |