| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r | 
| her3 | 0.215 | tbx16 | -0.162 | 
| pkdccb | 0.160 | h1m | -0.111 | 
| lhx5 | 0.154 | tbxta | -0.110 | 
| sfrp1a | 0.152 | eve1 | -0.105 | 
| otx2a | 0.147 | ved | -0.099 | 
| aldob | 0.141 | cdx4 | -0.097 | 
| prdm14 | 0.138 | ddit4 | -0.095 | 
| si:ch211-152c2.3 | 0.134 | wnt11f2 | -0.095 | 
| alcamb | 0.131 | dnajc1 | -0.094 | 
| si:ch211-222l21.1 | 0.129 | si:dkey-261j4.5 | -0.094 | 
| hmgb2a | 0.126 | lamp2 | -0.089 | 
| hnrnpa0b | 0.124 | si:dkey-68o6.5 | -0.088 | 
| pfkfb4b | 0.122 | npc2 | -0.088 | 
| hspb1 | 0.120 | pho | -0.088 | 
| otx2b | 0.116 | nanog | -0.087 | 
| eef1a1l1 | 0.116 | gtf2a1 | -0.087 | 
| apoeb | 0.115 | h2af1al | -0.087 | 
| sox2 | 0.115 | mkrn4 | -0.086 | 
| sox3 | 0.114 | syncripl | -0.085 | 
| irx1b | 0.112 | acp5a | -0.085 | 
| si:ch73-1a9.3 | 0.106 | aif1l | -0.084 | 
| hmgn2 | 0.106 | spink2.1 | -0.083 | 
| polr3gla | 0.105 | ccna1 | -0.082 | 
| BX004981.1 | 0.103 | ddx4 | -0.082 | 
| sox19a | 0.102 | snai1a | -0.078 | 
| rpsa | 0.102 | rcor1 | -0.078 | 
| h2afvb | 0.100 | prkrip1 | -0.076 | 
| FQ377918.1 | 0.100 | xbp1 | -0.074 | 
| si:ch211-170d8.2 | 0.100 | rasgef1ba | -0.074 | 
| si:ch211-133n4.4 | 0.099 | hes6 | -0.073 | 
| ptmab | 0.096 | cth1 | -0.073 | 
| zic3 | 0.095 | larp7 | -0.072 | 
| anp32b | 0.094 | cldnd | -0.071 | 
| crtap | 0.094 | slc16a3 | -0.071 | 
| rps7 | 0.093 | zgc:173742 | -0.070 |