| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| XLOC-019859 | 0.475 | hspb1 | -0.085 |
| stc2b | 0.445 | tuba8l2 | -0.077 |
| gfra3 | 0.430 | apoc1 | -0.061 |
| XLOC-007078 | 0.360 | BX927258.1 | -0.060 |
| tcf21 | 0.350 | cdx4 | -0.055 |
| msc | 0.331 | apoeb | -0.053 |
| foxl2a | 0.328 | hoxb7a | -0.053 |
| ret | 0.326 | hoxc3a | -0.052 |
| tbx1 | 0.297 | aldoab | -0.052 |
| hlx1 | 0.254 | aldoaa | -0.051 |
| lhx2b | 0.230 | fn1b | -0.050 |
| pdgfc | 0.213 | si:dkey-16p21.8 | -0.049 |
| rdh8a | 0.211 | tmem38a | -0.049 |
| tlx1 | 0.200 | cycsb | -0.049 |
| ptprz1b | 0.190 | tpma | -0.048 |
| fgf16 | 0.188 | gapdh | -0.047 |
| nkx3.3 | 0.186 | sp5l | -0.047 |
| nkx2.3 | 0.171 | BX001014.2 | -0.047 |
| fbln5 | 0.170 | hes6 | -0.047 |
| adamtsl2 | 0.169 | srl | -0.046 |
| six2a | 0.167 | vox | -0.046 |
| ebf1a | 0.161 | mybphb | -0.046 |
| tuba8l3 | 0.160 | ldb3a | -0.046 |
| fgd4a | 0.159 | efnb2b | -0.045 |
| pitx3 | 0.149 | actn3a | -0.045 |
| nkx2.5 | 0.149 | tbx16 | -0.045 |
| barx2 | 0.147 | hoxc8a | -0.045 |
| col18a1b | 0.146 | tcf15 | -0.045 |
| notch3 | 0.144 | acta1b | -0.045 |
| isl2b | 0.141 | tnnc2 | -0.045 |
| phlda2 | 0.139 | tob1a | -0.045 |
| tmem98 | 0.139 | smyd1a | -0.044 |
| hoxa2b | 0.139 | msgn1 | -0.044 |
| foxp4 | 0.135 | ppp1r3b | -0.044 |
| isl2a | 0.131 | ak1 | -0.044 |