| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| foxd1 | 0.181 | meis1b | -0.048 |
| fezf2 | 0.115 | elavl3 | -0.046 |
| arxa | 0.113 | ptmaa | -0.046 |
| fgfrl1a | 0.103 | hoxb9a | -0.046 |
| chl1a | 0.100 | ptmab | -0.045 |
| vax1 | 0.100 | hoxc3a | -0.044 |
| col8a2 | 0.095 | hoxb3a | -0.044 |
| nkx2.4b | 0.095 | hoxb8a | -0.041 |
| nkx2.4a | 0.094 | h3f3d | -0.040 |
| epyc | 0.093 | myt1b | -0.038 |
| LOC100536607 | 0.092 | stx1b | -0.036 |
| dcn | 0.088 | tmeff1b | -0.035 |
| spon2a | 0.087 | tmsb | -0.035 |
| BX649313.1 | 0.085 | vim | -0.034 |
| CR751602.2 | 0.084 | rtn1a | -0.034 |
| podxl | 0.083 | tubb2b | -0.034 |
| col9a3 | 0.082 | hoxd3a | -0.033 |
| gpc5b | 0.081 | tubb5 | -0.033 |
| wnt7bb | 0.079 | stmn1b | -0.032 |
| fezf1 | 0.077 | slc1a3a | -0.032 |
| twist2 | 0.076 | elavl4 | -0.032 |
| znf1110 | 0.076 | gng3 | -0.032 |
| ptn | 0.076 | si:ch211-137a8.4 | -0.031 |
| col9a1b | 0.075 | hnrnpaba | -0.031 |
| lcn15 | 0.074 | si:ch73-386h18.1 | -0.031 |
| LOC100334677 | 0.074 | cplx2 | -0.031 |
| col2a1b | 0.073 | si:ch211-57n23.4 | -0.031 |
| myl9a | 0.073 | vamp2 | -0.031 |
| ctgfa | 0.073 | hoxa3a | -0.031 |
| cnmd | 0.072 | si:ch73-21g5.7 | -0.031 |
| col8a1a | 0.072 | pax3a | -0.031 |
| loxl5b | 0.072 | myt1a | -0.031 |
| optc | 0.071 | hoxc9a | -0.031 |
| eno4 | 0.071 | sb:cb81 | -0.030 |
| shha | 0.070 | stxbp1a | -0.030 |