| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| msgn1 | 0.633 | sox3 | -0.353 |
| lhx1a | 0.600 | id1 | -0.350 |
| gata5 | 0.597 | cxcr4b | -0.305 |
| ism1 | 0.578 | cited4b | -0.256 |
| gata6 | 0.574 | asb11 | -0.253 |
| efnb2a | 0.546 | sox19a | -0.236 |
| kirrel3l | 0.538 | zic2b | -0.223 |
| mespab | 0.536 | glulb | -0.220 |
| dkk1b | 0.536 | inka1a | -0.204 |
| FP102169.1 | 0.530 | si:ch1073-80i24.3 | -0.199 |
| pitx2 | 0.495 | foxd5 | -0.191 |
| foxa | 0.485 | sb:cb81 | -0.168 |
| efna1a | 0.462 | mex3b | -0.155 |
| mespaa | 0.460 | mych | -0.149 |
| zic2a | 0.453 | blf | -0.146 |
| dusp4 | 0.453 | cdca7a | -0.144 |
| sp5a | 0.453 | aldob | -0.143 |
| rnd1b | 0.433 | cxcr4a | -0.142 |
| osr1 | 0.430 | shisa2a | -0.134 |
| aplnrb | 0.426 | zgc:100951 | -0.130 |
| plekhn1 | 0.425 | zgc:173742 | -0.120 |
| flrt3 | 0.411 | nanog | -0.120 |
| aldh1a2 | 0.403 | foxh1 | -0.119 |
| sox32 | 0.402 | dnajb1b | -0.117 |
| aplnra | 0.380 | epcam | -0.115 |
| elovl6 | 0.380 | nnr | -0.112 |
| six4a | 0.379 | stk35l | -0.112 |
| lft2 | 0.379 | ccna1 | -0.110 |
| fscn1a | 0.377 | rbm7 | -0.108 |
| cyp27c1 | 0.371 | cldnd | -0.107 |
| lmo1 | 0.362 | thy1 | -0.107 |
| im:7138239 | 0.361 | zgc:64022 | -0.106 |
| trib3 | 0.360 | si:ch211-173m16.2 | -0.104 |
| ndr2 | 0.355 | LOC101885477 | -0.104 |
| krt99 | 0.354 | stmn1a | -0.103 |