| Positive correlation | Negative correlation | ||
| Gene | r | Gene | r |
| jag1a | 0.301 | gpm6ab | -0.170 |
| cdx4 | 0.260 | ckbb | -0.169 |
| cx43.4 | 0.242 | gng3 | -0.165 |
| hspb1 | 0.239 | elavl4 | -0.158 |
| chrd | 0.224 | snap25a | -0.150 |
| dla | 0.222 | gapdhs | -0.146 |
| irx3b | 0.222 | sncb | -0.146 |
| XLOC-003689 | 0.217 | stx1b | -0.145 |
| pax3a | 0.215 | stmn1b | -0.142 |
| nradd | 0.215 | vamp2 | -0.139 |
| BX927258.1 | 0.211 | rtn1b | -0.139 |
| sall4 | 0.208 | si:dkeyp-75h12.5 | -0.139 |
| apela | 0.208 | cplx2 | -0.138 |
| XLOC-003690 | 0.207 | atp6v0cb | -0.138 |
| XLOC-032526 | 0.204 | stxbp1a | -0.137 |
| wnt11r | 0.201 | calm1a | -0.137 |
| hmgb2a | 0.197 | calm2a | -0.134 |
| BX001014.2 | 0.195 | stmn2a | -0.133 |
| neurog1 | 0.190 | cadm4 | -0.132 |
| msx1b | 0.190 | ywhag2 | -0.132 |
| XLOC-003692 | 0.188 | id4 | -0.131 |
| sp5l | 0.185 | gnao1a | -0.130 |
| XLOC-042222 | 0.185 | nsg2 | -0.129 |
| her15.1 | 0.185 | gap43 | -0.129 |
| znfl2a | 0.183 | rnasekb | -0.128 |
| rtca | 0.183 | zgc:65894 | -0.127 |
| npm1a | 0.181 | mllt11 | -0.126 |
| tspan7 | 0.180 | fez1 | -0.126 |
| sb:cb81 | 0.178 | tmem59l | -0.125 |
| notch1a | 0.178 | csdc2a | -0.124 |
| homeza | 0.177 | atp6v1e1b | -0.123 |
| BX005254.3 | 0.175 | cplx2l | -0.123 |
| her12 | 0.175 | aplp1 | -0.123 |
| ran | 0.172 | ywhah | -0.122 |
| XLOC-039121 | 0.171 | syt2a | -0.122 |